RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TMEM56-RWDD3S4R434 201 aa16.27■□□□□ 0.19
TNFRSF1A-201ENST00000162749 A6NNC1 897 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 DEDDO75618 318 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LY6HO94772 140 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CDS2O95674 445 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 FAM157CP0CG43 387 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CTRB1P17538 263 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SRPXP78539 464 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 PXDC1Q5TGL8 231 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CTRB2Q6GPI1 263 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CENPEQ02224 2701 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SPG11Q96JI7 2443 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 WNT2P09544 360 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MORN2Q502X0 79 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CORO2AQ92828 525 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 C5orf30Q96GV9 206 aa16.26■□□□□ 0.19
TNFRSF1A-201ENST00000162749 NDUFA2O43678 99 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 YPEL1O60688 119 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 YPEL2Q96QA6 119 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 C19orf12Q9NSK7 152 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LINC00312Q9Y6C7 94 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 FSTL3O95633 263 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 RPL31P62899 125 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LRRC10Q5BKY1 277 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LINC00574Q9H8X3 128 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 UBTD1Q9HAC8 227 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 RAB9BQ9NP90 201 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TMED3Q9Y3Q3 217 aa16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LSM5Q9Y4Y9 91 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-201ENST00000162749 hADV38S2A0JD32 116 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ZNF729A6NN14 1252 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 DVL1O14640 695 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ST8SIA5O15466 376 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 NDUFB3O43676 98 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MBPP02686 304 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 RPL12P30050 165 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 UTF1Q5T230 341 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 RPL7L1Q6DKI1 246 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ZNF695Q8IW36 515 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SELENOHQ8IZQ5 122 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 BPIFCQ8NFQ6 507 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ABHD14BQ96IU4 210 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 PSG11Q9UQ72 335 aa16.24■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TSPAN9O75954 239 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ZNF273Q14593 569 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ZBTB34Q8NCN2 500 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 RNF141Q8WVD5 230 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MARC2Q969Z3 335 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 K7EPK0 472 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SCGB1D2O95969 90 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 IGHV3-7P01780 117 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 IGHV2-70P01814 119 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ZNF134P52741 427 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MEF2CQ06413 473 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 EIF4EBP1Q13541 118 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 FAM71E2Q8N5Q1 922 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 NEU4Q8WWR8 484 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LIN7CQ9NUP9 197 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 GFOD1Q9NXC2 390 aa16.23■□□□□ 0.19
TNFRSF1A-201ENST00000162749 VPS13CQ709C8 3753 aa16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MSMO1Q15800 293 aa16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TAAR5O14804 337 aa16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MRPS11P82912 194 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 BTN1A1Q13410 526 aa16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 OR52M1Q8NGK5 317 aa16.22■□□□□ 0.19
TNFRSF1A-201ENST00000162749 MMP23AO75900 390 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SERPINE2P07093 398 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 DAOP14920 347 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 CDKN1AP38936 164 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 SMCO1Q147U7 214 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 TMEM200BQ69YZ2 307 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ATRAIDQ6UW56 229 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 FAM216AQ8WUB2 273 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 H1FXQ92522 213 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 LEAP2Q969E1 77 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 IL22RA2Q969J5 263 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 AIFM2Q9BRQ8 373 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 ARHGAP32A7KAX9 2087 aa16.21■□□□□ 0.19
TNFRSF1A-201ENST00000162749 DUXBA0A1W2PPF3 345 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 APOC3P02656 99 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF16P17020 682 aaPredicted RBP16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 AVPI1Q5T686 147 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 BTNL3Q6UXE8 466 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PLEKHF2Q9H8W4 249 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZC4H2Q9NQZ6 224 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 IDI2-AS1Q9NZ38 188 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 FBXL17Q9UF56 701 aa16.21■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RAB19A4D1S5 217 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RNF212BA8MTL3 300 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 VDAC1P21796 283 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 TMEM33P57088 247 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 RPL30P62888 115 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 ZNF585BQ52M93 769 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 NMSQ5H8A3 153 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 IFI27L2Q9H2X8 130 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 GAL3ST2Q9H3Q3 398 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 PLA2G2EQ9NZK7 142 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 MED13LQ71F56 2210 aa16.2■□□□□ 0.18
TNFRSF1A-201ENST00000162749 SLC31A2O15432 143 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms