RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Actrt3Q8BXF8 369 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 D330020A13RikQ8C799 211 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Scnm1Q8K136 229 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr469Q8VF66 314 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Osr2Q91ZD1 312 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr961Q9EQ84 314 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gnpnat1Q9JK38 184 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Arhgef17Q80U35 2057 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ankdd1aA0A1L1ST07 508 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm6890A2BG94 208 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm1330D3Z460 184 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 GamtO35969 236 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ninj1O70131 152 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Galr1P56479 348 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Spatc1Q148B6 480 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Lin54Q571G4 749 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ifna15Q61718 190 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Pea15Q62048 130 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ifngr2Q63953 332 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Hand1Q64279 216 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Cdkl3Q8BLF2 595 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 LmlnQ8BMN4 681 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rft1Q8C3B8 541 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Osbpl11Q8CI95 751 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rcc1Q8VE37 421 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 P2ry6Q9ERK9 328 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Sp6Q9ESX2 376 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Klrc3Q9QXN7 221 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 TpbgQ9Z0L0 426 aa19.29■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Dock11A2AF47 2073 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr455A0A0B4J1M2 317 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 A0A286YDM2 672 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Spink14B9EJP9 96 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm7233E9PZI8 198 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm9732F6QVC4 198 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm8104K7N744 198 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Vmn1r80L7N1Z3 308 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 AcheP21836 614 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 ArsbP50429 534 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Msl2Q69ZF8 577 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Fam122bQ6NZE7 255 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Comtd1Q8BIG7 262 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Poldip2Q91VA6 368 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rtn4ip1Q924D0 396 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 AplfQ9D842 499 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Nbeal1E9PYP2 2688 aa19.28■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm17655A0A1B0GT13 591 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Tmem182B2RVY9 229 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Bet1lO35153 111 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Bloc1s3Q5U5M8 195 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Zfp87Q8K2A4 540 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr116Q923Q6 321 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 MmabQ9D273 237 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ceacam18Q9D871 376 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Pex14Q9R0A0 376 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Slurp1Q9Z0K7 110 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 NacaP70670 2187 aaKnown RBP19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Muc2Q80Z19 2680 aa19.27■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm3045A0A1D5RMA1 209 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Olfr251E9Q891 316 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Zfp976E9Q981 636 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Phb2O35129 299 aaKnown RBP19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 AanatO88816 205 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Wnt2P21552 360 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Apoc3P33622 99 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 FauP35545 74 aaKnown RBP19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Defa14P50712 85 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 AbraclQ4KML4 81 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Kat7Q5SVQ0 613 aaKnown RBP19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Mob3aQ8BSU7 217 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Mbnl3Q8R003 342 aaKnown RBP19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Stac2Q8R1B0 408 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Degs2Q8R2F2 323 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Olfr1495Q8VEZ4 319 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 B3galnt1Q920V1 331 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Mrps24Q9CQV5 167 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 SdhdQ9CXV1 159 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Eef1akmt1Q9CY45 214 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Arv1Q9D0U9 266 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Zbtb32Q9JKD9 465 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Fbxw4Q9JMJ2 410 aa19.27■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Cep250Q60952 2414 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Adgrg4B7ZCC9 3073 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 B1ARW8 110 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Gm21788J3QNH3 180 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Mesp2O08574 370 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 H2-K1P01901 369 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Lyz2P08905 148 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Ifna9P09235 190 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Rims4P60191 269 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Esp1Q3LHH8 102 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 McidasQ3UZ45 379 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Hes3Q61657 175 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Srsf7Q8BL97 267 aaKnown RBP19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Lpcat3Q91V01 487 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Fyttd1Q91Z49 317 aaKnown RBP19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Mbnl1Q9JKP5 341 aaKnown RBP19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Nprl2Q9WUE4 380 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 AireQ9Z0E3 552 aa19.26■□□□□ 0.67
Scn1b-201ENSMUST00000098548 Tmem185aA2AF53 350 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms