RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Shroom3Q9QXN0 1986 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1089A0A1L1SRK6 311 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zfp688E9Q5M9 274 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pira2F8VQ94 680 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 P01735 133 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mfap2P55002 183 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr890Q7TRD9 314 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 ClpsQ9CQC2 113 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Hsd17b6Q9R092 317 aa9.03□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zfp142G5E869 1843 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zfp114B2RRA8 586 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Kcnk15B2RVL1 343 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Aqp7O54794 303 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rbp4Q00724 201 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ly6eQ64253 130 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Znf784Q8BI69 297 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zfp52Q8BJ45 724 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Cbln4Q8BME9 198 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 FibinQ9CQS3 217 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Carhsp1Q9CR86 148 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zfp111Q9R164 701 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gli3Q61602 1583 aa9.02□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm15440D3Z3P4 90 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm20422E9PUR3 255 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01644 108 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01645 108 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01646 108 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01647 108 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CapzbP47757 277 aaKnown RBP9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Rnf133Q14B02 382 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dnd1Q6VY05 352 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1002Q8VFK2 318 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Shisa5Q9D7I0 235 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem178bM0QWJ9 172 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1229Q7TQZ9 311 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm11541Q8C4D8 108 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem212Q8C6V3 187 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Sval2Q99N75 144 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Wdr20Q9D5R2 567 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm609E9Q573 300 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Znf296E9Q6W4 445 aaKnown RBP9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm10799F7C7U2 104 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Polr2gP62488 172 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Serf2P84102 59 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lclat1Q3UN02 376 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr10Q60883 311 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1393Q8VFA7 311 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1404Q8VGE1 313 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr802Q8VGJ2 312 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr974Q8VH09 310 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Greb1lB9EJV3 1913 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm20815J3KMI0 227 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm20914J3QME2 227 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Spatc1Q148B6 480 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Slc34a1Q60825 637 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm21292Q78EE2 227 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Q8C3M9 231 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mmp16Q9WTR0 607 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp493E9Q1L8 384 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm3512L7N206 146 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem217Q14AF1 189 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lefty1Q64280 368 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fbxl17Q9QZN1 701 aa9.02□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm6665F6Y363 85 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Pitx3O35160 302 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cd74P04441 279 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 FahP35505 419 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ucp2P70406 309 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ascl1Q02067 231 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r236Q05A06 334 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Klf3Q60980 344 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 BocQ6AZB0 1110 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr803Q8VFI3 308 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ube2l6Q9QZU9 153 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm45783A0A1B0GT48 74 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Pax5Q02650 391 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cnn1Q08091 297 aaKnown RBP9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CybaQ61462 192 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vma21Q78T54 101 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Igsf21Q7TNR6 468 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1138Q8VFQ9 311 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lamtor1Q9CQ22 161 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Pdcd1lg2Q9WUL5 247 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 1700025B11RikA0A087WNZ6 93 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Prrt2E9PUL5 346 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Prss12O08762 761 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mtnd6P03925 172 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Drd3P30728 446 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Serinc5Q8BHJ6 461 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 RnasekQ8K3C0 98 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr480Q8VEZ0 312 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr715Q8VG49 315 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 4930512M02RikQ5SQK8 218 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 B130006D01RikQ8BRH6 153 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hoxc12Q8K5B8 280 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1462Q8VFW3 307 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mrpl24Q9CQ06 216 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 4930447A16RikQ9D5F6 132 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Q9DAL9 119 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P2rx4Q9JJX6 388 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms