RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	KALRN	O60229	2985 aa		14.15	□□□□□ -0.14
PHGDH-223	ENST00000641597	CLN5	O75503	358 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	IGKV1D-33	P01593	117 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	IGKV1-33	P01594	117 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	IGHV3-13	P01766	116 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	IGHV3-7	P01780	117 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	CEACAM1	P13688	526 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	SSTR5	P35346	364 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	FABP6	P51161	128 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	CCL11	P51671	97 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	BRWD1-AS2	P59051	145 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	OR8G1	Q15617	311 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZNF506	Q5JVG8	444 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	MRGPRD	Q8TDS7	321 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	FER1L6-AS2	Q96M78	137 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	RAB40C	Q96S21	281 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	CLN8	Q9UBY8	286 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	MMP9	P14780	707 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	TLE4	Q04727	773 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	FOXF2	Q12947	444 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	C11orf53	Q8IXP5	236 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	LILRB2	Q8N423	598 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	NANOS1	Q8WY41	292 aa	Known RBP	14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	RCC1L	Q96I51	464 aa	Known RBP	14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	SSX3	Q99909	188 aa		14.14	□□□□□ -0.15
PHGDH-223	ENST00000641597	OTOGL	Q3ZCN5	2332 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597		M0R296	226 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	WT1	P19544	449 aa	Predicted RBP	14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ELOB	Q15370	118 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZNF787	Q6DD87	383 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZDHHC16	Q969W1	377 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	TMPRSS5	Q9H3S3	457 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	IFT22	Q9H7X7	185 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZDHHC11	Q9H8X9	412 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	TMEM9B	Q9NQ34	198 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	MBNL3	Q9NUK0	354 aa	Known RBP	14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	SPTBN2	O15020	2390 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ROS1	P08922	2347 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	LOC102723971	A0A1B0GUV8	181 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	CLDN1	O95832	211 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	MDK	P21741	143 aa	Predicted RBP	14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZNF146	Q15072	292 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	SCGB1C1	Q8TD33	95 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	NIT2	Q9NQR4	276 aa		14.13	□□□□□ -0.15
PHGDH-223	ENST00000641597	C17orf98	A8MV24	154 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	LINC00587	B1AMM8	73 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	SH2D1B	O14796	132 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	PTBP3	O95758	552 aa	Known RBP	14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	GLIPR1	P48060	266 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	TNFSF10	P50591	281 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	FAM90A2P	Q658T7	463 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	FDCSP	Q8NFU4	85 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	COQ2	Q96H96	371 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	NPIPB11	E5RHQ5	1161 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	DFFB	O76075	338 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	S1PR2	O95136	353 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	RAB2A	P61019	212 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	GABRA6	Q16445	453 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	KDF1	Q8NAX2	398 aa	Predicted RBP	14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	NIPSNAP3B	Q9BS92	247 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	RBKS	Q9H477	322 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	POLDIP2	Q9Y2S7	368 aa		14.12	□□□□□ -0.15
PHGDH-223	ENST00000641597	IFITM10	A6NMD0	228 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	HSPB1	P04792	205 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	RD3L	P0DJH9	198 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	COL8A2	P25067	703 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	GABRA2	P47869	451 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	GATAD1	Q8WUU5	269 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	LSM10	Q969L4	123 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	BTBD17	A6NE02	478 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	OR5H1	A6NKK0	313 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	HBZ	P02008	142 aa		14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	KIAA0141	Q14154	515 aa	Predicted RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	GMPPA	Q96IJ6	420 aa	Predicted RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	LIN7C	Q9NUP9	197 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	METTL1	Q9UBP6	276 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZNF674	Q2M3X9	581 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	PDZD11	Q5EBL8	140 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	GFI1B	Q5VTD9	330 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	CDPF1	Q6NVV7	123 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	C9orf106	Q8NAJ2	232 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	WIPI2	Q9Y4P8	454 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	RIF1	Q5UIP0	2472 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	PLCE1	Q9P212	2302 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	CYB5B	O43169	146 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	IL2RG	P31785	369 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	MDH2	P40926	338 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	CD200	P41217	278 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	LRRC75B	Q2VPJ9	315 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	UTF1	Q5T230	341 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	RPP25L	Q8N5L8	163 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	OR8G5	Q8NG78	346 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	TVP23C	Q96ET8	276 aa		14.1	□□□□□ -0.15
PHGDH-223	ENST00000641597	ODAM	A1E959	279 aa		14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	LINC00473	A8K010	186 aa		14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	CEBPZOS	A8MTT3	80 aa		14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	AP4M1	O00189	453 aa		14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	ST8SIA5	O15466	376 aa		14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	PPIH	O43447	177 aa	Known RBP	14.09	□□□□□ -0.15
PHGDH-223	ENST00000641597	ZG16	O60844	167 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms