RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
SYNE2-228ENST00000639659 FUT3P21217 361 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 ETV1P50549 477 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 DEFA5Q01523 94 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 CCDC58Q4VC31 144 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 TMPRSS11AQ6ZMR5 421 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 GALMQ96C23 342 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 SMIM19Q96E16 107 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 YPEL2Q96QA6 119 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 IFI27L2Q9H2X8 130 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 ABRACLQ9P1F3 81 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 STEAP1Q9UHE8 339 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 NUBP2Q9Y5Y2 271 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 TNCP24821 2201 aa11.49□□□□□ -0.57
SYNE2-228ENST00000639659 CA11O75493 328 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 SNRPBP14678 240 aaKnown RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 IGFBP3P17936 291 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 ZP3P21754 424 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 RASSF2P50749 326 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 CRIP2P52943 208 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 GAPTQ8N292 157 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 RHOXF1Q8NHV9 184 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 RHOVQ96L33 236 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 OR14A2Q96R54 314 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 SLA2Q9H6Q3 261 aa11.48□□□□□ -0.57
SYNE2-228ENST00000639659 CHMP1AQ9HD42 196 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 RANGRFQ9HD47 186 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
SYNE2-228ENST00000639659 A8MZ25 164 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 H0Y980 276 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 PDCD6O75340 191 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 SC5DO75845 299 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 HTD2P86397 168 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
SYNE2-228ENST00000639659 Q499Y3 187 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 DMKNQ6E0U4 476 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-228ENST00000639659 SIGIRRQ6IA17 410 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 OR5T1Q8NG75 326 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 GHSRQ92847 366 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 ABHD14BQ96IU4 210 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 Q96M66 194 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 PIPOXQ9P0Z9 390 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 NKX1-2Q9UD57 310 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-228ENST00000639659 WASHC3Q9Y3C0 194 aa11.47□□□□□ -0.57
SYNE2-228ENST00000639659 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 OR5H14A6NHG9 310 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 H0YJW9 148 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 RAB29O14966 203 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
SYNE2-228ENST00000639659 LALBAP00709 142 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 TFAP2AP05549 437 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 MYL12AP19105 171 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 AKIRIN2Q53H80 203 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 C6orf141Q5SZD1 244 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-228ENST00000639659 OR9G4Q8NGQ1 327 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 APH1BQ8WW43 257 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 NEDD4LQ96PU5 975 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 PARP12Q9H0J9 701 aaKnown RBP11.46□□□□□ -0.57
SYNE2-228ENST00000639659 ADAM30Q9UKF2 790 aa11.46□□□□□ -0.57
SYNE2-228ENST00000639659 LOC100130705A0A1B0GUX0 176 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FAM90A7PA6NKC0 464 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FAM90A23PA8MXZ1 464 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 OGG1O15527 345 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 CPEP16870 476 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FSTP19883 344 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 CAPGP40121 348 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 RPS16P62249 146 aaKnown RBP11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FXYD3Q14802 87 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 PSG5Q15238 335 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 HMGN3Q15651 99 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 LCN12Q6JVE5 192 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FAM71F2Q6NXP2 309 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 ZNF554Q86TJ5 538 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 POC5Q8NA72 575 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 IL17DQ8TAD2 202 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 FGF20Q9NP95 211 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-228ENST00000639659 BABAM2Q9NXR7 383 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 CLEC2DQ9UHP7 191 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 CEPT1Q9Y6K0 416 aa11.45□□□□□ -0.58
SYNE2-228ENST00000639659 SLC22A1O15245 554 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 SLC25A17O43808 307 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 GPX5O75715 221 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 RBBP9O75884 186 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 CNIH1O95406 144 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 GLAP06280 429 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 MC5RP33032 325 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 YIF1BQ5BJH7 314 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 OR10K2Q6IF99 312 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 FAAP24Q9BTP7 215 aa11.44□□□□□ -0.58
SYNE2-228ENST00000639659 MRPS18AQ9NVS2 196 aaKnown RBP11.44□□□□□ -0.58
SYNE2-228ENST00000639659 PLECQ15149 4684 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms