RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 NDUFAF6Q330K2 333 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 REEP3Q6NUK4 255 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 C1orf94Q6P1W5 598 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 ATRAIDQ6UW56 229 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF730Q6ZMV8 503 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 PLEKHG7Q6ZR37 379 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 TCEANCQ8N8B7 351 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 CYB561A3Q8NBI2 242 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 SLC37A3Q8NCC5 494 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OR2T12Q8NG77 320 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OR52I1Q8NGK6 324 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OR4P4Q8NGL7 312 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OR1B1Q8NGR6 318 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 FBXO25Q8TCJ0 367 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 AENQ8WTP8 325 aaKnown RBP2.4□□□□□ -2.02
CCDC7-213ENST00000639290 C8orf49Q96NF6 230 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 CLCC1Q96S66 551 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 UPK3BQ9BT76 320 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 TLNRD1Q9H1K6 362 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.4□□□□□ -2.02
CCDC7-213ENST00000639290 AK6Q9Y3D8 172 aaKnown RBP2.4□□□□□ -2.02
CCDC7-213ENST00000639290 TRBV9A0A0B4J1U6 114 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 TRAV3A0A0B4J244 114 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 IZUMO1RA6ND01 250 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 HSBP1O75506 76 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 KHDRBS3O75525 346 aaKnown RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 ATP5LO75964 103 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 CCNB2O95067 398 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 FADS2O95864 444 aaKnown RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 TFPI2P48307 235 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 AMTP48728 403 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 UBE2G2P60604 165 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 B2MP61769 119 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 RPL31P62899 125 aaKnown RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 PSG4Q00888 419 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 FOXI1Q12951 378 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 CALCOCO2Q13137 446 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 RIGQ13278 110 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 OR8G1Q15617 311 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 HIST3H3Q16695 136 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 DGUOKQ16854 277 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 RFTN2Q52LD8 501 aaPredicted RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 LY6G6FQ5SQ64 297 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 TPTE2P1Q5T6R2 138 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 FAM27BQ5VT28 67 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 Q6ZVQ6 151 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 CYS1Q717R9 158 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 ODF3L1Q8IXM7 274 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 C19orf18Q8NEA5 215 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 OR8J2Q8NGG1 315 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 OR52E5Q8NH55 327 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 APOBEC3DQ96AK3 386 aaPredicted RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 OSBPL10Q9BXB5 764 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 CST11Q9H112 138 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 OR2S2Q9NQN1 319 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 KIF25Q9UIL4 384 aa2.4□□□□□ -2.03
CCDC7-213ENST00000639290 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
CCDC7-213ENST00000639290 IGLV5-52A0A0A0MRZ9 124 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 A0A0A6YYD4 124 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 A0A0A6YYH2 397 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 IGHV2-26A0A0B4J1V2 119 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 TRAPPC13A5PLN9 417 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 A6NJ64 397 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 CENPXA8MT69 81 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SNURFLB1AK76 121 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 H3BUA1 57 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 IL3P08700 152 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ZNF32P17041 273 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 BGNP21810 368 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 IDH2P48735 452 aaKnown RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 MEF2CQ06413 473 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 RIPPLY1Q0D2K3 151 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 DEFB114Q30KQ6 69 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SPIN4Q56A73 249 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 PAN3Q58A45 887 aaKnown RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 FOXL2NBQ6ZUU3 175 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SYS1Q8N2H4 156 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 C15orf54Q8N8G6 183 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 NEXN-AS1Q8NBZ9 246 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 FNDC8Q8TC99 324 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 TMEM239Q8WW34 195 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 MAP1LC3CQ9BXW4 147 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 CSTL1Q9H114 145 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 NHEJ1Q9H9Q4 299 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ABCD2Q9UBJ2 740 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 AMMECR1Q9Y4X0 333 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 GMPPBQ9Y5P6 360 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 SAR1BQ9Y6B6 198 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 TRBV4-1A0A0J9YWV2 114 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 A0A1B0GW15 77 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 PRSS37A4D1T9 235 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 RBBP9O75884 186 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 GATA1P15976 413 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 CDC34P49427 236 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 RAB7AP51149 207 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 ELLP55199 621 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-213ENST00000639290 CCL18P55774 89 aa2.39□□□□□ -2.03
CCDC7-213ENST00000639290 KRTAP10-8P60410 259 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms