RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MT-CO3P00414 261 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 JMJD7P0C870 316 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 PGA5P0DJD9 388 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 PAX1P15863 534 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 CENPVQ7Z7K6 275 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 LHX4Q969G2 390 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 PRSS50Q9UI38 385 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 COL27A1Q8IZC6 1860 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 SMCO3A2RU48 225 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 IL18BPO95998 194 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 CEACAM6P40199 344 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 CYP2G1PQ6ZSU1 146 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 SSX9Q7RTT3 188 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 ESPL1Q14674 2120 aa16.98■□□□□ 0.31
SYNGAP1-227ENST00000638142 J3QW42 95 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 PLGLB1Q02325 96 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 TNFRSF9Q07011 255 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 C4orf17Q53FE4 359 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SPATA46Q5T0L3 261 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 WDR86Q86TI4 376 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SCCPDHQ8NBX0 429 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 BCL2L2Q92843 193 aaPredicted RBP16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SPRY4Q9C004 299 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 IL2RGP31785 369 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 MEF2BQ02080 365 aaPredicted RBP16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 ZNF146Q15072 292 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 MDP1Q86V88 176 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 RPP25LQ8N5L8 163 aaKnown RBP16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SNX22Q96L94 193 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SSX3Q99909 188 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 SMIM7Q9BQ49 75 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 DDA1Q9BW61 102 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 HSPB7Q9UBY9 170 aa16.97■□□□□ 0.31
SYNGAP1-227ENST00000638142 A0A087X0M5 115 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 A0A1B0GX30 115 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 CLDN1O95832 211 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 NCR3LG1Q68D85 454 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 FAM180AQ6UWF9 173 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 ZBTB34Q8NCN2 500 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR10A7Q8NGE5 316 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 UBALD1Q8TB05 177 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 SH2D1BO14796 132 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 MSMO1Q15800 293 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 IGFBP7Q16270 282 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 ATP6V1FQ16864 119 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 OR8G2PQ6IF36 304 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 TMEM183AQ8IXX5 376 aa16.96■□□□□ 0.31
SYNGAP1-227ENST00000638142 TMEM250H0YL14 139 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 LAMTOR5O43504 91 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 KBTBD11O94819 623 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 C3AR1Q16581 482 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 TMEM241Q24JQ0 296 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 TBC1D28Q2M2D7 210 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 BEND4Q6ZU67 534 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 ZNF645Q8N7E2 425 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 RNASEH2CQ8TDP1 164 aaKnown RBP16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 SRD5A3Q9H8P0 318 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 MKRN2OSH3BPM6 223 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 DVL1O14640 695 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 NXPH2O95156 264 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 IGKV1D-33P01593 117 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 IGKV1-33P01594 117 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR4X1Q8NH49 305 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 MEGF10Q96KG7 1140 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 PYGO2Q9BRQ0 406 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 C12orf49Q9H741 205 aa16.95■□□□□ 0.3
SYNGAP1-227ENST00000638142 ARHGAP21Q5T5U3 1957 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 A0A1B0GV90 55 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 MBP02144 154 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 PSMB3P49720 205 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 JOSD1Q15040 202 aaPredicted RBP16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 ADIRFQ15847 76 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 FBXW9Q5XUX1 488 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 PRO1933Q9H354 126 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 PLA2G3Q9NZ20 509 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 CTXND1A0A1B0GTU2 59 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 TMEM105Q8N8V8 129 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 TMEM147Q9BVK8 224 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 KCNIP1Q9NZI2 227 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 MED12LQ86YW9 2145 aa16.94■□□□□ 0.3
SYNGAP1-227ENST00000638142 PFN1P07737 140 aaKnown RBP16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 P0C879 139 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 ACSM6Q6P461 480 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 GPR87Q9BY21 358 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 CHD3Q12873 2000 aaKnown RBP16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 C9orf172C9J069 976 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 SLC31A2O15432 143 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 BSXQ3C1V8 233 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 DCAF10Q5QP82 559 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 UNQ6494/PRO21346Q6UXR6 183 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 LINC00696Q6ZRV3 163 aa16.93■□□□□ 0.3
SYNGAP1-227ENST00000638142 CDIPTO14735 213 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 PDGFBP01127 241 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 MRPL49Q13405 166 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 LBHQ53QV2 105 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 COA6Q5JTJ3 125 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 C16orf82Q7Z2V1 217 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 TGIF2LYQ8IUE0 185 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 MANBALQ9NQG1 85 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms