RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 C22orf46C9J442 243 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 IGLV2-14P01704 120 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 IGHV1-8P0DP01 117 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 HLA-GP17693 338 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 ZNF134P52741 427 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 CT45A1Q5HYN5 189 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 C1orf122Q6ZSJ8 110 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 LRRC75A-AS1Q8N1F1 130 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 C11orf42Q8N5U0 333 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 C8orf31Q8N9H6 132 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 OR11H7Q8NGC8 314 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 CT45A3Q8NHU0 189 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 ABHD14AQ9BUJ0 271 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 MGAT4CQ9UBM8 478 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 SESN1Q9Y6P5 492 aa9.66□□□□□ -0.86
CLN6-223ENST00000637823 A0A087X0M5 115 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 A0A1B0GX30 115 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 DBX1A6NMT0 343 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 KIAA1324LA8MWY0 1029 aaPredicted RBP9.65□□□□□ -0.86
CLN6-223ENST00000637823 M0R1W7 72 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 ST8SIA5O15466 376 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 CXCL3P19876 107 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 F2RP25116 425 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 GPR12P47775 334 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 TMEM187Q14656 261 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 DEFB113Q30KQ7 82 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 SLC25A48Q6ZT89 311 aaKnown RBP9.65□□□□□ -0.86
CLN6-223ENST00000637823 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
CLN6-223ENST00000637823 ZNF596Q8TC21 504 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 GLYATL2Q8WU03 294 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 ABHD14BQ96IU4 210 aa9.65□□□□□ -0.86
CLN6-223ENST00000637823 ZNF436Q9C0F3 470 aaPredicted RBP9.65□□□□□ -0.86
CLN6-223ENST00000637823 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 PIGBOS1A0A0B4J2F0 54 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 H0Y980 276 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 RAB29O14966 203 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 SLC31A2O15432 143 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 TNFSF12O43508 249 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 ENSAO43768 121 aaKnown RBP9.64□□□□□ -0.87
CLN6-223ENST00000637823 FOXH1O75593 365 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 OR5AC1P0C628 307 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 SLC25A16P16260 332 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 ZFP36P26651 326 aaKnown RBP9.64□□□□□ -0.87
CLN6-223ENST00000637823 ERVFRD-1P60508 538 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 SRPXP78539 464 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 CD83Q01151 205 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 EIF4EBP1Q13541 118 aaPredicted RBP9.64□□□□□ -0.87
CLN6-223ENST00000637823 CLEC12BQ2HXU8 276 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 C2orf68Q2NKX9 166 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 SP6Q3SY56 376 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 UTF1Q5T230 341 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LIN54Q6MZP7 749 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 ZNF66Q6ZN08 573 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LGI3Q8N145 548 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LINC00311Q8N616 119 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 KIR3DL3Q8N743 410 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 TCTEX1D1Q8N7M0 179 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LRTM2Q8N967 370 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 LEAP2Q969E1 77 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 TP53RKQ96S44 253 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 HSD17B10Q99714 261 aaKnown RBP9.64□□□□□ -0.87
CLN6-223ENST00000637823 TMEM222Q9H0R3 208 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 TMEM133Q9H2Q1 129 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 SDHAF2Q9NX18 166 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 PIPOXQ9P0Z9 390 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 ONECUT1Q9UBC0 465 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 POLR3KQ9Y2Y1 108 aaPredicted RBP9.64□□□□□ -0.87
CLN6-223ENST00000637823 WNK2Q9Y3S1 2297 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 FBN2P35556 2912 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 APCP25054 2843 aa9.64□□□□□ -0.87
CLN6-223ENST00000637823 A0A1W2PPE3 182 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 A8MV72 311 aaPredicted RBP9.63□□□□□ -0.87
CLN6-223ENST00000637823 J3QR06 171 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 GOSR2O14653 212 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 OR2A4O95047 310 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 UCP1P25874 307 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 GNG10P50151 68 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 PRRX1P54821 245 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 LCN2P80188 198 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 PAX2Q02962 417 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 CATR1Q13166 79 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 HIST2H2BCQ6DN03 193 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 TCTE3Q8IZS6 198 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 OR9G1Q8NH87 305 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 ASB13Q8WXK3 278 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 MSI2Q96DH6 328 aaKnown RBP9.63□□□□□ -0.87
CLN6-223ENST00000637823 C5orf30Q96GV9 206 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 OR2A7Q96R45 310 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 GPHA2Q96T91 129 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms