RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 Q9N2K0 584 aa14.4□□□□□ -0.1
CLN6-210ENST00000635747 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
CLN6-210ENST00000635747 ZNF580Q9UK33 172 aa14.4□□□□□ -0.1
CLN6-210ENST00000635747 TMEM272A0A1B0GTI8 110 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 LINC01548A6NM66 108 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 IFITM5A6NNB3 132 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 OR5H8P0DN80 308 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 GADD45AP24522 165 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 CEACAM6P40199 344 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 OR3A3P47888 321 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 ACTBP60709 375 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 CXorf66Q5JRM2 361 aaPredicted RBP14.39□□□□□ -0.11
CLN6-210ENST00000635747 GPR61Q9BZJ8 451 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 IFI27L2Q9H2X8 130 aa14.39□□□□□ -0.11
CLN6-210ENST00000635747 NUDT19A8MXV4 375 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 ST8SIA5O15466 376 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 TNFAIP8O95379 198 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 IGF1P05019 195 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 ELANEP08246 267 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 RAB6AP20340 208 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 VDAC1P21796 283 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 MC5RP33032 325 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 FOXE3Q13461 319 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 Q6ZPA2 131 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 SPARTQ8N0X7 666 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 RAB3CQ96E17 227 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 HDHD3Q9BSH5 251 aaPredicted RBP14.38□□□□□ -0.11
CLN6-210ENST00000635747 KIAA1456Q9P272 454 aa14.38□□□□□ -0.11
CLN6-210ENST00000635747 ZNF107Q9UII5 783 aaPredicted RBP14.38□□□□□ -0.11
CLN6-210ENST00000635747 METTL21EPA6NDL7 271 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 OR5H14A6NHG9 310 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 TRDCB7Z8K6 153 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 NBR2O15453 112 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 CD3GP09693 182 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 IGLL1P15814 213 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 PSMB9P28065 219 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 MYCNOSP40205 109 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 SERPINB10P48595 397 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 PLAC9Q5JTB6 97 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 ZNF695Q8IW36 515 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 PTX4Q96A99 478 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 CENPOQ9BU64 300 aa14.37□□□□□ -0.11
CLN6-210ENST00000635747 HLA-DRB1P01911 266 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 SCTP09683 121 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 FGF9P31371 208 aaPredicted RBP14.36□□□□□ -0.11
CLN6-210ENST00000635747 THBS3P49746 956 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 OR10A3P58181 314 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 KIR2DS1Q14954 304 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 ARL6IP1Q15041 203 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 C22orf42Q6IC83 251 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 LINC00482Q8N8I6 264 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 RNF152Q8N8N0 203 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 KLHL30-AS1Q8NEE0 82 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 NPBQ8NG41 125 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 OR4A4PQ8NGN8 299 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 OR10R2Q8NGX6 335 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 RNF5Q99942 180 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 HSPB9Q9BQS6 159 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 AGMATQ9BSE5 352 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 MCRIP2Q9BUT9 160 aaKnown RBP14.36□□□□□ -0.11
CLN6-210ENST00000635747 C11orf54Q9H0W9 315 aaPredicted RBP14.36□□□□□ -0.11
CLN6-210ENST00000635747 ZNF221Q9UK13 617 aa14.36□□□□□ -0.11
CLN6-210ENST00000635747 SHISA3A0PJX4 238 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 RBBP9O75884 186 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 IGHG4P01861 327 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
CLN6-210ENST00000635747 CDX1P47902 265 aaPredicted RBP14.35□□□□□ -0.11
CLN6-210ENST00000635747 C5orf64Q2M2E5 130 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 FOXB2Q5VYV0 432 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 LIN54Q6MZP7 749 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 TPRA1Q86W33 373 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 MRPL41Q8IXM3 137 aaKnown RBP14.35□□□□□ -0.11
CLN6-210ENST00000635747 ABHD14BQ96IU4 210 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 OR1A1Q9P1Q5 309 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 STUB1Q9UNE7 303 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 SSR3Q9UNL2 185 aa14.35□□□□□ -0.11
CLN6-210ENST00000635747 NDUFA3O95167 84 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 DIRAS3O95661 229 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 GSTP1P09211 210 aaKnown RBP14.34□□□□□ -0.11
CLN6-210ENST00000635747 CT45A6P0DMU7 189 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 CT45A5P0DMU8 189 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 CT45A7P0DMV0 189 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 CFHR3Q02985 330 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 RPL39P5Q59GN2 51 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 ZNF773Q6PK81 442 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 FAM131AQ6UXB0 335 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 ETV3LQ6ZN32 361 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 C8orf86Q6ZUL3 223 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 KCTD7Q96MP8 289 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 TOLLIPQ9H0E2 274 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 OR51J1Q9H342 316 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 TXNL4BQ9NX01 149 aaKnown RBP14.34□□□□□ -0.11
CLN6-210ENST00000635747 KCNK7Q9Y2U2 307 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 WASHC3Q9Y3C0 194 aa14.34□□□□□ -0.11
CLN6-210ENST00000635747 NOTOA8MTQ0 251 aa14.33□□□□□ -0.12
CLN6-210ENST00000635747 H0YJW9 148 aa14.33□□□□□ -0.12
CLN6-210ENST00000635747 H7C2Y5 167 aa14.33□□□□□ -0.12
CLN6-210ENST00000635747 RAB27BO00194 218 aa14.33□□□□□ -0.12
CLN6-210ENST00000635747 FABP7O15540 132 aa14.33□□□□□ -0.12
CLN6-210ENST00000635747 RPLP1P05386 114 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms