RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ZBTB25P24278 435 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 IL3RAP26951 378 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 TALDO1P37837 337 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 CEACAM6P40199 344 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 REG1BP48304 166 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 HABP2Q14520 560 aaPredicted RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 HERPUD1Q15011 391 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 FBLN7Q53RD9 439 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 DHRS7BQ6IAN0 325 aaPredicted RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 C12orf54Q6X4T0 127 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 Q6ZSV7 163 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 THNSL2Q86YJ6 484 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 ODF3L1Q8IXM7 274 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 DRAM1Q8N682 238 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 OR4F5Q8NH21 305 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 RTN4IP1Q8WWV3 396 aaPredicted RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 MAFIPQ8WZ33 124 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 BORCS5Q969J3 196 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 S100A16Q96FQ6 103 aaKnown RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 CMTM3Q96MX0 182 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 AGMATQ9BSE5 352 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 ABHD14AQ9BUJ0 271 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 PARP12Q9H0J9 701 aaKnown RBP7.8□□□□□ -1.16
LINC00339-210ENST00000635675 C16orf95Q9H693 158 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 AUNIPQ9H7T9 357 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 OR1A1Q9P1Q5 309 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 SLC23A1Q9UHI7 598 aa7.8□□□□□ -1.16
LINC00339-210ENST00000635675 IGHV1-3A0A0C4DH29 117 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 LANCL1O43813 399 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 FAM106CPP0CH98 169 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 PTHLHP12272 177 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 MDKP21741 143 aaPredicted RBP7.79□□□□□ -1.16
LINC00339-210ENST00000635675 GNG2P59768 71 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 IGSF11Q5DX21 431 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 OR2AK2Q8NG84 335 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 OR56B4Q8NH76 319 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 LINC01006Q8NI28 216 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 CAPSLQ8WWF8 208 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 CABLES2Q9BTV7 478 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 ST6GALNAC5Q9BVH7 336 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 TOLLIPQ9H0E2 274 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 C11orf54Q9H0W9 315 aaPredicted RBP7.79□□□□□ -1.16
LINC00339-210ENST00000635675 IFI27L2Q9H2X8 130 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 BEX1Q9HBH7 125 aa7.79□□□□□ -1.16
LINC00339-210ENST00000635675 TRBV6-7A0A0A0MS04 114 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 A0A1B0GUS0 222 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 CLPSL1A2RUU4 121 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 HSPA12AO43301 675 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 TXNL1O43396 289 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 APOA1P02647 267 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SNRNP70P08621 437 aaKnown RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 OR3A3P47888 321 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF45Q02386 682 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 DCTN2Q13561 401 aaKnown RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 EBI3Q14213 229 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF79Q15937 498 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 TMEM69Q5SWH9 247 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF833PQ6ZTB9 187 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 TGIF2LXQ8IUE1 241 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 EDARADDQ8WWZ3 215 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 RBM14Q96PK6 669 aaKnown RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF251Q9BRH9 671 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 NPFFR1Q9GZQ6 430 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SRRQ9GZT4 340 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 GHITMQ9H3K2 345 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 RANBP3Q9H6Z4 567 aaPredicted RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 RDH8Q9NYR8 311 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SAA2-SAA4A0A096LPE2 208 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 MEIS3P1A6NDR6 274 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF736B4DX44 427 aaPredicted RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 RAB29O14966 203 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 BET1O15155 118 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 OR2F2O95006 317 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 IGKV1D-33P01593 117 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 IGKV1-33P01594 117 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 FCER2P06734 321 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SAA2P0DJI9 122 aaPredicted RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 CD1BP29016 333 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ETV6P41212 452 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 PPP5CP53041 499 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 TAS2R20P59543 309 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 BLCAPP62952 87 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 Q8N2B8 174 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 C3orf56Q8N813 242 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 OR4C13Q8NGP0 309 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 OR10J5Q8NHC4 309 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ABHD14BQ96IU4 210 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SDHCQ99643 169 aaPredicted RBP7.78□□□□□ -1.16
LINC00339-210ENST00000635675 SLC25A33Q9BSK2 321 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 ZNF747Q9BV97 191 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 PIPOXQ9P0Z9 390 aa7.78□□□□□ -1.16
LINC00339-210ENST00000635675 IGHV3-72A0A0B4J1Y9 119 aa7.77□□□□□ -1.17
LINC00339-210ENST00000635675 PROP1O75360 226 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms