RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 WIPF2Q8TF74 440 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-207ENST00000634712 CENPOQ9BU64 300 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 MRPL20Q9BYC9 149 aaKnown RBP12.45□□□□□ -0.42
LINC00339-207ENST00000634712 IFI27L2Q9H2X8 130 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 LIN7CQ9NUP9 197 aaKnown RBP12.45□□□□□ -0.42
LINC00339-207ENST00000634712 OR1A1Q9P1Q5 309 aa12.45□□□□□ -0.42
LINC00339-207ENST00000634712 TCRBV4S1A1TA0A5B7 111 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 PSMB11A5LHX3 300 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 MFNGO00587 321 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 FABP7O15540 132 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 FCGR3AP08637 254 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 SERPINB10P48595 397 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 FAM71F2Q6NXP2 309 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 Q8N9W7 124 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 OR4F17Q8NGA8 305 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 CHPT1Q8WUD6 406 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 R3HDM4Q96D70 268 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 ABHD14BQ96IU4 210 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 OR4F4Q96R69 305 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 NABP2Q9BQ15 211 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF251Q9BRH9 671 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 C11orf54Q9H0W9 315 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF221Q9UK13 617 aa12.44□□□□□ -0.42
LINC00339-207ENST00000634712 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 BET1O15155 118 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 AIREO43918 545 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 IGHG2P01859 326 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 F2RL1P55085 397 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 SLC35B1P78383 322 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 CD83Q01151 205 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 MMDQ15546 238 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 OR10J5Q8NHC4 309 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 LGALS14Q8TCE9 139 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 ABCG5Q9H222 651 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 PLSCR3Q9NRY6 295 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 RDH8Q9NYR8 311 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF230Q9UIE0 474 aaPredicted RBP12.43□□□□□ -0.42
LINC00339-207ENST00000634712 RNF150Q9ULK6 438 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 TSSC4Q9Y5U2 329 aaPredicted RBP12.43□□□□□ -0.42
LINC00339-207ENST00000634712 KCNAB3O43448 404 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 GSTT2P0CG29 244 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 GPR12P47775 334 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 SCAND1P57086 179 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 ACTBP60709 375 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 RPL39P5Q59GN2 51 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 MAFIPQ8WZ33 124 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 NOL4LQ96MY1 436 aaPredicted RBP12.43□□□□□ -0.42
LINC00339-207ENST00000634712 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 GON7Q9BXV9 100 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 PARP12Q9H0J9 701 aaKnown RBP12.43□□□□□ -0.42
LINC00339-207ENST00000634712 RHBDL2Q9NX52 303 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 LINC00527Q9UJ94 153 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
LINC00339-207ENST00000634712 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
LINC00339-207ENST00000634712 VWFP04275 2813 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 IGKV1-6A0A0C4DH72 117 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 H7C2Y5 167 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 AP4M1O00189 453 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
LINC00339-207ENST00000634712 MC5RP33032 325 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 SOX6P35712 828 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 GNG2P59768 71 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 LSM3P62310 102 aaKnown RBP12.42□□□□□ -0.42
LINC00339-207ENST00000634712 PITPNAQ00169 270 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 SRSF7Q16629 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00339-207ENST00000634712 IGSF11Q5DX21 431 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 HACD4Q5VWC8 232 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 CROCCP3Q8IVE0 287 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
LINC00339-207ENST00000634712 YIPF6Q96EC8 236 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 AGMATQ9BSE5 352 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 ST6GALNAC5Q9BVH7 336 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00339-207ENST00000634712 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
LINC00339-207ENST00000634712 OR5H14A6NHG9 310 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
LINC00339-207ENST00000634712 TMEM127O75204 238 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 PF4V1P10720 104 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 DTYMKP23919 212 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 C10orf99Q6UWK7 81 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 FAM131AQ6UXB0 335 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 STPG2Q8N412 459 aa12.41□□□□□ -0.42
LINC00339-207ENST00000634712 ELF5Q9UKW6 265 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-207ENST00000634712 TRBV6-7A0A0A0MS04 114 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 LINC01548A6NM66 108 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 NBR2O15453 112 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 DIRAS3O95661 229 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 OR8U9P0C7N5 309 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 TCTEX1D4Q5JR98 221 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-207ENST00000634712 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 COMMD1Q8N668 190 aa12.4□□□□□ -0.42
LINC00339-207ENST00000634712 OR5H6Q8NGV6 325 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms