RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 C6orf201Q7Z4U5 140 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR1N2Q8NGR9 330 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 FAAP24Q9BTP7 215 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 KLK15Q9H2R5 256 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 GHITMQ9H3K2 345 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 GNB4Q9HAV0 340 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 PARP11Q9NR21 331 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 KIAA1456Q9P272 454 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 STEAP1Q9UHE8 339 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 LSM2Q9Y333 95 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 WSB1Q9Y6I7 421 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 SORL1Q92673 2214 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR5H14A6NHG9 310 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 RAB29O14966 203 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 BPNT1O95861 308 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 UCHL1P09936 223 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 SRMP19623 302 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 HTR2CP28335 458 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 BLVRBP30043 206 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 ECI1P42126 302 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 RAB9AP51151 201 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF616Q08AN1 781 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF260Q3ZCT1 412 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 HSD17B12Q53GQ0 312 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 RBM48Q5RL73 367 aaKnown RBP9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF660Q6AZW8 331 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 PRR25Q96S07 402 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 RIMS4Q9H426 269 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
SOX2-OT-247ENST00000628347 A0A0A6YYD4 124 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 RRHO14718 337 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 ST8SIA5O15466 376 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 RBBP9O75884 186 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 CT45A6P0DMU7 189 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 CT45A5P0DMU8 189 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 CT45A7P0DMV0 189 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 MC5RP33032 325 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 GNB1P62873 340 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 NDPQ00604 133 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 SPHARQ15513 63 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR6M1Q8NGM8 313 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 RNF5Q99942 180 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 NICN1Q9BSH3 213 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 VCXQ9H320 206 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 MGAT4AQ9UM21 535 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 U3KQK5 164 aa9.67□□□□□ -0.86
SOX2-OT-247ENST00000628347 SACSQ9NZJ4 4579 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FOXI3A8MTJ6 420 aaPredicted RBP9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 H0YJW9 148 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 IRF3Q14653 427 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 CD200R1LQ6Q8B3 271 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FAM131AQ6UXB0 335 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 CEACAM19Q7Z692 300 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF429Q86V71 674 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FAM89BQ8N5H3 189 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 IL1F10Q8WWZ1 152 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 EDARADDQ8WWZ3 215 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 KCNK15Q9H427 330 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 CHMP1AQ9HD42 196 aaPredicted RBP9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 PLEKHJ1Q9NW61 149 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 HSF4Q9ULV5 492 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FOXA2Q9Y261 457 aaPredicted RBP9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 FBXO7Q9Y3I1 522 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 NUBP2Q9Y5Y2 271 aa9.66□□□□□ -0.86
SOX2-OT-247ENST00000628347 SLC17A2O00624 439 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 OVOL1O14753 267 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 SOX15O60248 233 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 EGR2P11161 476 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 CX3CL1P78423 397 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 HLA-DRB3P79483 266 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 RPL39P5Q59GN2 51 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 PYHIN1Q6K0P9 492 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 DCUN1D4Q92564 292 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 UFD1Q92890 307 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 PTX4Q96A99 478 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 GFI1Q99684 422 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 LYSTQ99698 3801 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 URM1Q9BTM9 101 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 TOLLIPQ9H0E2 274 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 PARP12Q9H0J9 701 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 ISYNA1Q9NPH2 558 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 TPSG1Q9NRR2 321 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 SCN3BQ9NY72 215 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 AK3Q9UIJ7 227 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 WASHC3Q9Y3C0 194 aa9.65□□□□□ -0.86
SOX2-OT-247ENST00000628347 A0A1W2PN81 502 aa9.64□□□□□ -0.87
SOX2-OT-247ENST00000628347 PTGES3LE9PB15 166 aa9.64□□□□□ -0.87
SOX2-OT-247ENST00000628347 LINC01619G3V211 115 aa9.64□□□□□ -0.87
SOX2-OT-247ENST00000628347 SOCS1O15524 211 aa9.64□□□□□ -0.87
SOX2-OT-247ENST00000628347 SPDEFO95238 335 aa9.64□□□□□ -0.87
SOX2-OT-247ENST00000628347 LGALS1P09382 135 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms