RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 KIAA2026Q5HYC2 2103 aa9.68□□□□□ -0.86
LINC00963-220ENST00000625171 USF3Q68DE3 2245 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 hCG_1809904A0A1W2PP81 198 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 A0A1W2PPE2 198 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 DUXBA0A1W2PPF3 345 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 A0A1W2PR64 198 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 A0A1W2PRV1 198 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 RNF212BA8MTL3 300 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 H0Y980 276 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 CDS2O95674 445 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 GIPP09681 153 aaPredicted RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 OR8U9P0C7N5 309 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 F2RP25116 425 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 UCP1P25874 307 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 LMO4P61968 165 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF273Q14593 569 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 TMEM187Q14656 261 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 SLC25A48Q6ZT89 311 aaKnown RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 OR52B4Q8NGK2 314 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 C10orf105Q8TEF2 133 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 SECTM1Q8WVN6 248 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 DACT3Q96B18 629 aaPredicted RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 MSI2Q96DH6 328 aaKnown RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF436Q9C0F3 470 aaPredicted RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 TMEM222Q9H0R3 208 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 UNKLQ9H9P5 680 aaKnown RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 BEX4Q9NWD9 120 aaPredicted RBP9.67□□□□□ -0.86
LINC00963-220ENST00000625171 GNG12Q9UBI6 72 aa9.67□□□□□ -0.86
LINC00963-220ENST00000625171 DNHD1Q96M86 4753 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 C3orf85A0A1B0GTC6 90 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 M0R1W7 72 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 IGHV2-5P01817 119 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 RPA2P15927 270 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 HOXB4P17483 251 aaPredicted RBP9.66□□□□□ -0.86
LINC00963-220ENST00000625171 CXCL3P19876 107 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 PI3P19957 117 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 VAMP1P23763 118 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 PPP1CCP36873 323 aaKnown RBP9.66□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF137PP52743 207 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 RAP2BP61225 183 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 GNB2P62879 340 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 CYCSP99999 105 aaKnown RBP9.66□□□□□ -0.86
LINC00963-220ENST00000625171 CARTPTQ16568 116 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 AVPI1Q5T686 147 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 LIN54Q6MZP7 749 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 LIAT1Q6ZQX7 453 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 FGFRL1Q8N441 504 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 DRAM1Q8N682 238 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 KIR3DL3Q8N743 410 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 OR5M8Q8NGP6 311 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 MBD6Q96DN6 1003 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
LINC00963-220ENST00000625171 SSBP3Q9BWW4 388 aaPredicted RBP9.66□□□□□ -0.86
LINC00963-220ENST00000625171 PIPOXQ9P0Z9 390 aa9.66□□□□□ -0.86
LINC00963-220ENST00000625171 PPIAL4CA0A0B4J2A2 164 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 RAB29O14966 203 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 PROP1O75360 226 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 PPIAL4GP0DN37 164 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 IGHV1-8P0DP01 117 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF134P52741 427 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 PAX2Q02962 417 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 GNMTQ14749 295 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 ESCO2Q56NI9 601 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 CT45A1Q5HYN5 189 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 LGI3Q8N145 548 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF525Q8N782 197 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 CT45A3Q8NHU0 189 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 H1FXQ92522 213 aaKnown RBP9.65□□□□□ -0.86
LINC00963-220ENST00000625171 FAM168AQ92567 244 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 C18orf12Q96KH6 178 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 PIMREGQ9BSJ6 248 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 PARP12Q9H0J9 701 aaKnown RBP9.65□□□□□ -0.86
LINC00963-220ENST00000625171 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 RBM7Q9Y580 266 aaKnown RBP9.65□□□□□ -0.86
LINC00963-220ENST00000625171 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
LINC00963-220ENST00000625171 ZNF469Q96JG9 3925 aaPredicted RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 LOC105371242A0A075B767 164 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 KIAA1324LA8MWY0 1029 aaPredicted RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 MMP23AO75900 390 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 C1QBP02746 253 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 OR5AC1P0C628 307 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 SLC25A6P12236 298 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 CD99P14209 185 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 ATP5J2P56134 94 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 H2BFSP57053 126 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 TAGLNQ01995 201 aaKnown RBP9.64□□□□□ -0.87
LINC00963-220ENST00000625171 IL15RAQ13261 267 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 CLEC2AQ6UVW9 174 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 PRSS57Q6UWY2 283 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 OR9G1Q8NH87 305 aa9.64□□□□□ -0.87
LINC00963-220ENST00000625171 UBALD1Q8TB05 177 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms