RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 C19orf12Q9NSK7 152 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 KAAG1Q9UBP8 84 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 CTSZQ9UBR2 303 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 A0A1W2PPR1 153 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 RNF222A6NCQ9 220 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 RP2O75695 350 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 IGHV3-7P01780 117 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 RLN2P04090 185 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 LYL1P12980 280 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 NFYBP25208 207 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 NUP62P37198 522 aaPredicted RBP17.73■□□□□ 0.43
SPAST-204ENST00000621856 GPR12P47775 334 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 ZNF345Q14585 488 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 Q3ZCU0 254 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 THOC7Q6I9Y2 204 aaKnown RBP17.73■□□□□ 0.43
SPAST-204ENST00000621856 BTNL3Q6UXE8 466 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 ZNF767PQ75MW2 155 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 KCNRGQ8N5I3 272 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 OR1S1Q8NH92 325 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 FAM216AQ8WUB2 273 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 NEU4Q8WWR8 484 aaPredicted RBP17.73■□□□□ 0.43
SPAST-204ENST00000621856 SDHAF2Q9NX18 166 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 TAS2R3Q9NYW6 316 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 LAMP3Q9UQV4 416 aa17.73■□□□□ 0.43
SPAST-204ENST00000621856 FCN3O75636 299 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 VDAC1P21796 283 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 ESCO2Q56NI9 601 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 TEX261Q6UWH6 196 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 OR52M1Q8NGK5 317 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 RNASE11Q8TAA1 199 aaKnown RBP17.72■□□□□ 0.43
SPAST-204ENST00000621856 GAL3ST2Q9H3Q3 398 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 LPAR3Q9UBY5 353 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 U3KQ87 197 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 KCNAB3O43448 404 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 MBPP02686 304 aaPredicted RBP17.72■□□□□ 0.43
SPAST-204ENST00000621856 ZNF273Q14593 569 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 TMEM30BQ3MIR4 351 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 PRAMEF5Q5TYX0 476 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 TCTEX1D2Q8WW35 142 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 LEAP2Q969E1 77 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 AGMATQ9BSE5 352 aa17.72■□□□□ 0.43
SPAST-204ENST00000621856 KANTRA0A1W2PQU2 76 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 A6NNC1 897 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 CLDN1O95832 211 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 EIF4EBP1Q13541 118 aaPredicted RBP17.71■□□□□ 0.43
SPAST-204ENST00000621856 NMSQ5H8A3 153 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 ZNF843Q8N446 348 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 LINC00574Q9H8X3 128 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 ZFP57Q9NU63 452 aa17.71■□□□□ 0.43
SPAST-204ENST00000621856 YLPM1P49750 1951 aaKnown RBP17.7■□□□□ 0.42
SPAST-204ENST00000621856 DEDDO75618 318 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 LY6HO94772 140 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 IGHV2-70P01814 119 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 RAB7AP51149 207 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 RPL30P62888 115 aaKnown RBP17.7■□□□□ 0.42
SPAST-204ENST00000621856 ZNF585BQ52M93 769 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 OR2B11Q5JQS5 317 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 AVPI1Q5T686 147 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 ZNF66Q6ZN08 573 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 ZNF680Q8NEM1 530 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 OR4D5Q8NGN0 318 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 ZNF714Q96N38 554 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 ABHD14AQ9BUJ0 271 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 CFAP46Q8IYW2 2715 aa17.7■□□□□ 0.42
SPAST-204ENST00000621856 K7EPK0 472 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 ITGB1BP1O14713 200 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 SLC31A2O15432 143 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 FSTL3O95633 263 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 DAOP14920 347 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 LPAR6P43657 344 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 TMEM200BQ69YZ2 307 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 FAM71E2Q8N5Q1 922 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 RRNAD1Q96FB5 475 aaKnown RBP17.69■□□□□ 0.42
SPAST-204ENST00000621856 HSD17B10Q99714 261 aaKnown RBP17.69■□□□□ 0.42
SPAST-204ENST00000621856 RALYQ9UKM9 306 aaKnown RBP17.69■□□□□ 0.42
SPAST-204ENST00000621856 BCL2L11O43521 198 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 IFNA7P01567 189 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 IGKV1-39P01597 117 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 IGKV1D-39P04432 117 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 EPHA1P21709 976 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 ZNF134P52741 427 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 AKR1C2P52895 323 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 IFI27L2Q9H2X8 130 aa17.69■□□□□ 0.42
SPAST-204ENST00000621856 RPUSD1Q9UJJ7 312 aaKnown RBP17.69■□□□□ 0.42
SPAST-204ENST00000621856 ST8SIA3O43173 380 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 MMP23AO75900 390 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 CCL3L1P16619 93 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 GNG10P50151 68 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 MRPS11P82912 194 aaKnown RBP17.68■□□□□ 0.42
SPAST-204ENST00000621856 UTF1Q5T230 341 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 OR10A7Q8NGE5 316 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 GPR146Q96CH1 333 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 TIMD4Q96H15 378 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 POMT1Q9Y6A1 747 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 ARID1AO14497 2285 aa17.68■□□□□ 0.42
SPAST-204ENST00000621856 A0A1W2PPE3 182 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 CLEC18AA5D8T8 446 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 M0R1X1 148 aa17.67■□□□□ 0.42
SPAST-204ENST00000621856 PPIHO43447 177 aaKnown RBP17.67■□□□□ 0.42
SPAST-204ENST00000621856 CFDP00746 253 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms