RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 E7EQL1 145 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 CRYZL1O95825 349 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 P2RX3P56373 397 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF146Q15072 292 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 TESK1Q15569 626 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 RAB1CQ92928 201 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 SLC25A31Q9H0C2 315 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF462Q96JM2 2506 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 PIGBOS1A0A0B4J2F0 54 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 GPR137BO60478 399 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 HES1Q14469 280 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
CPSF1-213ENST00000620219 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
CPSF1-213ENST00000620219 DHRS11Q6UWP2 260 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 DIRC2Q96SL1 478 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
CPSF1-213ENST00000620219 E5RGE8 158 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 NAPSAO96009 420 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF497Q6ZNH5 498 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 VDAC1P21796 283 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 DRAM1Q8N682 238 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 FOXI3A8MTJ6 420 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-213ENST00000620219 H0YIZ8 118 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 SHOXO15266 292 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 SIGLEC5O15389 551 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 MED6O75586 246 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 PRB1P04280 392 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 CD200P41217 278 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 ESCO2Q56NI9 601 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-213ENST00000620219 SLC35E4Q6ICL7 350 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 PRSS54Q6PEW0 395 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 GAL3ST2Q9H3Q3 398 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 CXorf66Q5JRM2 361 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-213ENST00000620219 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
CPSF1-213ENST00000620219 ERGIC1Q969X5 290 aa13.17□□□□□ -0.3
CPSF1-213ENST00000620219 COL27A1Q8IZC6 1860 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-213ENST00000620219 hCG_1809904A0A1W2PP81 198 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 A0A1W2PPE2 198 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 A0A1W2PR64 198 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 A0A1W2PRV1 198 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-213ENST00000620219 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 NMES1Q9C002 83 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 TMEM231Q9H6L2 316 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 IFNL4K9M1U5 179 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 CCL3L1P16619 93 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 OR2B8PP59922 312 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 TMEM267Q0VDI3 215 aaPredicted RBP13.16□□□□□ -0.3
CPSF1-213ENST00000620219 TRAT1Q6PIZ9 186 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 BAP18Q8IXM2 172 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 ADH4P08319 380 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
CPSF1-213ENST00000620219 IGKV1D-17A0A075B6S4 117 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 CHST1O43916 411 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 THBDP07204 575 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 ERVFRD-1P60508 538 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 TMEM187Q14656 261 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 NHLRC3Q5JS37 347 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 OR10Z1Q8NGY1 313 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 APOA2P02652 100 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 RRASP10301 218 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 LGALS4P56470 323 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 RPL39P5Q59GN2 51 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 TOR2AQ5JU69 321 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 TRAF4Q9BUZ4 470 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-213ENST00000620219 FBXL17Q9UF56 701 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 RCC2Q9P258 522 aaKnown RBP13.15□□□□□ -0.3
CPSF1-213ENST00000620219 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 TMEM33P57088 247 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 LINC00205P59089 165 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 Q6ZSR3 168 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 COQ2Q96H96 371 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 PSENENQ9NZ42 101 aa13.15□□□□□ -0.3
CPSF1-213ENST00000620219 LEUTXA8MZ59 168 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 METTL15P1P0C7V9 234 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 CLLU1Q5K131 121 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 MOB3BQ86TA1 216 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 VKORC1L1Q8N0U8 176 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 TRBV6-7A0A0A0MS04 114 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 CD8AP01732 235 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 MBPP02686 304 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-213ENST00000620219 SNCAP37840 140 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 C14orf79Q96F83 325 aa13.14□□□□□ -0.31
CPSF1-213ENST00000620219 ZNF714Q96N38 554 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms