RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 SCGB1D1O95968 90 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 METTL15P1P0C7V9 234 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 IAPPP10997 89 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 B4GALT1P15291 398 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 TNFSF10P50591 281 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 FGF8P55075 233 aaPredicted RBP5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 GFI1BQ5VTD9 330 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 ZADH2Q8N4Q0 377 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF611Q8N823 705 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 PINX1Q96BK5 328 aaKnown RBP5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 CYYR1Q96J86 154 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 TECTBQ96PL2 329 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 VAX2Q9UIW0 290 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 RTTNQ86VV8 2226 aa5.98□□□□□ -1.45
SRGAP3-213ENST00000618999 LOC102723971A0A1B0GUV8 181 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 C5orf63A6NC05 138 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MAP1LC3B2A6NCE7 125 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 OR6C6A6NF89 314 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF705FA8MVS1 300 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 TCAPO15273 167 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ST8SIA5O15466 376 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 IGHV3-9P01782 118 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SOD3P08294 240 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF705DP0CH99 300 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF705BP0CI00 300 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MDKP21741 143 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 TAS2R60P59551 318 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 HNF4GQ14541 408 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 TMEM241Q24JQ0 296 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 RNFT1Q5M7Z0 435 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 CLDND2Q8NHS1 167 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 C14orf144Q96I85 54 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MAP1LC3BQ9GZQ8 125 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 OR51I2Q9H344 312 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF665Q9H7R5 613 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 PSENENQ9NZ42 101 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 TRGV5A0A0B4J1U4 118 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 RBM11P57052 281 aaKnown RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ENDOGQ14249 297 aaKnown RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 CLEC12BQ2HXU8 276 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SPANXN5Q5MJ07 72 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SAMD5Q5TGI4 173 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 PRR18Q8N4B5 295 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 OR10J5Q8NHC4 309 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ABHD3Q8WU67 409 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 NOL4LQ96MY1 436 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ALKBH3Q96Q83 286 aaPredicted RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 CALHM2Q9HA72 323 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 NAT8Q9UHE5 227 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MRPS18CQ9Y3D5 142 aaKnown RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SPTBN4Q9H254 2564 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SPTA1P02549 2419 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 PIEZO1Q92508 2521 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF32P17041 273 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MAS1LP35410 378 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 GALR1P47211 349 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 OR8G2PQ6IF36 304 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 ETFRF1Q6IPR1 90 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 MRGPRGQ86SM5 289 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 GGNQ86UU5 652 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 SELENOHQ8IZQ5 122 aaKnown RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 TMEM171Q8WVE6 324 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 RFNGQ9Y644 331 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 PRRC2CQ9Y520 2896 aaKnown RBP5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 EXPH5Q8NEV8 1989 aa5.97□□□□□ -1.45
SRGAP3-213ENST00000618999 LRP5LA4QPB2 252 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF737O75373 536 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 MRPL33O75394 65 aaKnown RBP5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 CLDN1O95832 211 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 TPRP12270 2363 aaKnown RBP5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 ERVS71-1P61550 626 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 IQCJQ1A5X6 159 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 BSXQ3C1V8 233 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 C10orf128Q5T292 105 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 FAM27BQ5VT28 67 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 TMEM37Q8WXS4 190 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 GTF3AQ92664 365 aaKnown RBP5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 ZNF837Q96EG3 531 aaPredicted RBP5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 RSG1Q9BU20 258 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 CCL28Q9NRJ3 127 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 DECR2Q9NUI1 292 aa5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 CISD1Q9NZ45 108 aaKnown RBP5.96□□□□□ -1.45
SRGAP3-213ENST00000618999 PCSK5Q92824 1860 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 PATE4P0C8F1 98 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 IL2RGP31785 369 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 SPSB3Q6PJ21 355 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 BTF3L4Q96K17 158 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 SF3B5Q9BWJ5 86 aaKnown RBP5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 PRSS50Q9UI38 385 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 WASF3Q9UPY6 502 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 PHF3Q92576 2039 aaKnown RBP5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 FOXI3A8MTJ6 420 aaPredicted RBP5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 E9PLN8 166 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 RPL36A-HNRNPH2H7BZ11 118 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 DVL1O14640 695 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms