RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 IGHV1-46P01743 117 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 CD5P06127 495 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 P0C879 139 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 OMGP23515 440 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 ASCL1P50553 236 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 STX12Q86Y82 276 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 Q8TCH9 128 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 EDARADDQ8WWZ3 215 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 RNF7Q9UBF6 113 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
NR1H3-235ENST00000616973 RAI1Q7Z5J4 1906 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 IGHV3OR15-7A0A075B7D8 119 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 UMAD1C9J7I0 102 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 RNASEK-C17orf49H0YIS7 233 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 TOR1AO14656 332 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 DFFBO76075 338 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 CST7O76096 145 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 ATP6V0CP27449 155 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 CAMLGP49069 296 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 SULT1A1P50225 295 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 RPL30P62888 115 aaKnown RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 TNFAIP6P98066 277 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 IZUMO4Q1ZYL8 232 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 FAM53AQ6NSI3 398 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 SVBPQ8N300 66 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 SNRNP40Q96DI7 357 aaKnown RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 HSD17B10Q99714 261 aaKnown RBP13.1□□□□□ -0.31
NR1H3-235ENST00000616973 ATP5SQ99766 215 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 C19orf12Q9NSK7 152 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 DYSFO75923 2080 aa13.1□□□□□ -0.31
NR1H3-235ENST00000616973 F8W036 122 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 F2RL2O00254 374 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 SIGLEC5O15389 551 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 YPEL1O60688 119 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 TSPAN15O95858 294 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 TNFSF4P23510 183 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 DVL1P1P54792 670 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-235ENST00000616973 IQCF2Q8IXL9 164 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 ZNF561Q8N587 486 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-235ENST00000616973 YPEL2Q96QA6 119 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 DCTN5Q9BTE1 182 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 NKX6-2Q9C056 277 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-235ENST00000616973 GCM1Q9NP62 436 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 LAMP3Q9UQV4 416 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 CLDN1O95832 211 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 SNCAP37840 140 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 ID4P47928 161 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 BRWD1-AS2P59051 145 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 ZNF273Q14593 569 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 ZNF808Q8N4W9 903 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-235ENST00000616973 RFESDQ8TAC1 157 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 C14orf79Q96F83 325 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 SDSLQ96GA7 329 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 DIRC2Q96SL1 478 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 OR6C3Q9NZP0 311 aa13.09□□□□□ -0.31
NR1H3-235ENST00000616973 LAMA5O15230 3695 aa13.08□□□□□ -0.31
NR1H3-235ENST00000616973 IGHV3-43A0A0B4J1X8 118 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 RAMP3O60896 148 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 PRH1P02810 166 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 CGB3P0DN86 165 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 CGB7P0DN87 165 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 IGHV3-43DP0DP04 118 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.32
NR1H3-235ENST00000616973 RBPJQ06330 500 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 MORN2Q502X0 79 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 MIDNQ504T8 468 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 TMEM182Q6ZP80 229 aaPredicted RBP13.08□□□□□ -0.32
NR1H3-235ENST00000616973 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 TCTEX1D2Q8WW35 142 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 RAB9BQ9NP90 201 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 PSG11Q9UQ72 335 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 FAM96BQ9Y3D0 163 aa13.08□□□□□ -0.32
NR1H3-235ENST00000616973 PRRC2CQ9Y520 2896 aaKnown RBP13.08□□□□□ -0.32
NR1H3-235ENST00000616973 DPRXA6NFQ7 191 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 CLDN14O95500 239 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 THBDP07204 575 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 TMEM217Q8N7C4 229 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ESRP2Q9H6T0 727 aaKnown RBP13.07□□□□□ -0.32
NR1H3-235ENST00000616973 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 CFAP47Q6ZTR5 3102 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 FAM157AC9JC47 383 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 RAB29O14966 203 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ST8SIA5O15466 376 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 CD55P08174 381 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 CD80P33681 288 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ARHGDIBP52566 201 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 LOXL3P58215 753 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
NR1H3-235ENST00000616973 STUMQ69YW2 141 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms