RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 WNT10AQ9GZT5 417 aa13.3□□□□□ -0.28
CBWD3-211ENST00000615061 C11orf54Q9H0W9 315 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-211ENST00000615061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD3-211ENST00000615061 ETV7Q9Y603 341 aa13.3□□□□□ -0.28
CBWD3-211ENST00000615061 BET1O15155 118 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 TXNL1O43396 289 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 CD1BP29016 333 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 LSAMPQ13449 338 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
CBWD3-211ENST00000615061 TALDO1P37837 337 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 SERPINB10P48595 397 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 SCAND1P57086 179 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 DTX3Q8N9I9 347 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 OR4A4PQ8NGN8 299 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 WIPF2Q8TF74 440 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-211ENST00000615061 NABP2Q9BQ15 211 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 RDH8Q9NYR8 311 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
CBWD3-211ENST00000615061 NCBP2LA6PVI3 153 aaKnown RBP13.27□□□□□ -0.28
CBWD3-211ENST00000615061 M0QZK8 103 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 SSX5O60225 188 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 PEX14O75381 377 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 MOSP00540 346 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 F2RL1P55085 397 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 KIR2DS1Q14954 304 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 SLC25A46Q96AG3 418 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 RITA1Q96K30 269 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 MRPS26Q9BYN8 205 aaKnown RBP13.27□□□□□ -0.28
CBWD3-211ENST00000615061 PLSCR3Q9NRY6 295 aa13.27□□□□□ -0.28
CBWD3-211ENST00000615061 TRAV18A0A075B6X5 111 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 RAB29O14966 203 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 PROP1O75360 226 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 TFAP2AP05549 437 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 GSTP1P09211 210 aaKnown RBP13.27□□□□□ -0.29
CBWD3-211ENST00000615061 CD28P10747 220 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 PTHLHP12272 177 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 ARL6IP1Q15041 203 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 GLDNQ6ZMI3 551 aaPredicted RBP13.27□□□□□ -0.29
CBWD3-211ENST00000615061 Q8N9W7 124 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 EDARADDQ8WWZ3 215 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 ST6GALNAC5Q9BVH7 336 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 PIPOXQ9P0Z9 390 aa13.27□□□□□ -0.29
CBWD3-211ENST00000615061 TRBV6-7A0A0A0MS04 114 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 ITGB1BP1O14713 200 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 FGF16O43320 207 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 SCGNO76038 276 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 CT45A6P0DMU7 189 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 CT45A5P0DMU8 189 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 CT45A7P0DMV0 189 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 LINC00205P59089 165 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 CTF1Q16619 201 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 GPR107Q5VW38 600 aa13.26□□□□□ -0.29
CBWD3-211ENST00000615061 DRAXINQ8NBI3 349 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-211ENST00000615061 LINC01548A6NM66 108 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 TSPAN15O95858 294 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 DTYMKP23919 212 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 CNTFRP26992 372 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 ALDH3B2P48448 385 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 GNG2P59768 71 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 Q6ZS49 121 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 CROCCP3Q8IVE0 287 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 OR10J5Q8NHC4 309 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 PHF21AQ96BD5 680 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 NOL4LQ96MY1 436 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-211ENST00000615061 S1PR3Q99500 378 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 GABARAPO95166 117 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 OR8U9P0C7N5 309 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 SAMD12Q8N8I0 201 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 OR8U1Q8NH10 309 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 TOLLIPQ9H0E2 274 aa13.25□□□□□ -0.29
CBWD3-211ENST00000615061 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 M0QZ24 198 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 TMEM127O75204 238 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 FBXO24O75426 580 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 ACTBP60709 375 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
CBWD3-211ENST00000615061 PNLIPRP3Q17RR3 467 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 FAM71F2Q6NXP2 309 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 FAM71E2Q8N5Q1 922 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 OR5AU1Q8NGC0 362 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 CITED2Q99967 270 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-211ENST00000615061 ABCG5Q9H222 651 aa13.24□□□□□ -0.29
CBWD3-211ENST00000615061 FCER2P06734 321 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 GPR12P47775 334 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 PITPNAQ00169 270 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 MMDQ15546 238 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 UBE2NLQ5JXB2 153 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-211ENST00000615061 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
CBWD3-211ENST00000615061 GINS4Q9BRT9 223 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms