RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FGFRL1Q8N441 504 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 ATP5SQ99766 215 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 TREM2Q9NZC2 230 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 STRAPQ9Y3F4 350 aaKnown RBP11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
PCDHGA3-202ENST00000612467 IGHV2OR16-5A0A0B4J2B6 119 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 SYNGR2O43760 224 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 COX5AP20674 150 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 FLI1Q01543 452 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 OR8G2PQ6IF36 304 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 OR2Z1Q8NG97 314 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 WIPI2Q9Y4P8 454 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 APC2O95996 2303 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1B0GU03 582 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 PRR33A8MZF0 331 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 LINC00587B1AMM8 73 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 AQP7O14520 342 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 TM4SF5O14894 197 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 Q8IYB0 196 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 HES4Q9HCC6 221 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF727A8MUV8 499 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 S1PR2O95136 353 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 STX12Q86Y82 276 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 FAM234AQ9H0X4 552 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 COA4Q9NYJ1 87 aa11.8□□□□□ -0.52
PCDHGA3-202ENST00000612467 A0A1W2PPE3 182 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 TMEM30CPA0ZSE6 113 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 SULT1A1P50225 295 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 RAB13P51153 203 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 RPL23AP62750 156 aaKnown RBP11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 AKR1C8PQ5T2L2 129 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 AVPI1Q5T686 147 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 IGFL2Q6UWQ7 119 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 LCN15Q6UWW0 184 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 LRRC29Q8WV35 223 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 SARAFQ96BY9 339 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 GALMQ96C23 342 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 CLN8Q9UBY8 286 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 SELLP14151 372 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 RAB5CP51148 216 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 ELLP55199 621 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 SMCO4Q9NRQ5 59 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 KCNIP1Q9NZI2 227 aa11.79□□□□□ -0.52
PCDHGA3-202ENST00000612467 PKDREJQ9NTG1 2253 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 LINC00473A8K010 186 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 DEFA4P12838 97 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 FAM209BQ5JX69 171 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 MOB1BQ7L9L4 216 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 CYB561D1Q8N8Q1 229 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 M0R1B8 84 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 CLDN1O95832 211 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 GCH1P30793 250 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 TAS2R30P59541 319 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZGRF1Q86YA3 2104 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 LIN7CQ9NUP9 197 aaKnown RBP11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 PSG11Q9UQ72 335 aa11.78□□□□□ -0.52
PCDHGA3-202ENST00000612467 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 CGAP01215 116 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 CD82P27701 267 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 BAXQ07812 192 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 ICAM4Q14773 271 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 Q3ZCU0 254 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 SOHLH1Q5JUK2 328 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 BHLHA15Q7RTS1 189 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF525Q8N782 197 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 TCTEX1D2Q8WW35 142 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 LEAP2Q969E1 77 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 RBKSQ9H477 322 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 ZNF665Q9H7R5 613 aa11.77□□□□□ -0.52
PCDHGA3-202ENST00000612467 TMEM210A6NLX4 147 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZFP92A6NM28 416 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 HOXA1P49639 335 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 S100PBPQ96BU1 408 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
PCDHGA3-202ENST00000612467 PBDC1Q9BVG4 233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms