RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
HDDC2-206ENST00000608461 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 GNG2P59768 71 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 LSAMPQ13449 338 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
HDDC2-206ENST00000608461 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 ACOT12Q8WYK0 555 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 C11orf54Q9H0W9 315 aaPredicted RBP11.38□□□□□ -0.59
HDDC2-206ENST00000608461 GAB2Q9UQC2 676 aa11.38□□□□□ -0.59
HDDC2-206ENST00000608461 IGKV1-6A0A0C4DH72 117 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 M0QZ24 198 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 XRCC3O43542 346 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 TFAP2AP05549 437 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 GSTT2P0CG29 244 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 GSTT2BP0CG30 244 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 MC5RP33032 325 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 TGFBR1P36897 503 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 VBP1P61758 197 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 NCS1P62166 190 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 ABCA11PQ4W5N1 156 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 UBE2NLQ5JXB2 153 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 GPR141Q7Z602 305 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 C5orf56Q8N8D9 126 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
HDDC2-206ENST00000608461 RDH8Q9NYR8 311 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 OR1A1Q9P1Q5 309 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
HDDC2-206ENST00000608461 TRAV18A0A075B6X5 111 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 TMEM235A6NFC5 223 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 OR5H14A6NHG9 310 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 CBX5P45973 191 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 RORCP51449 518 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 KRTAP10-3P60369 221 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 CTF1Q16619 201 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
HDDC2-206ENST00000608461 NABP2Q9BQ15 211 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 BCL7BQ9BQE9 202 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 ZNF251Q9BRH9 671 aa11.36□□□□□ -0.59
HDDC2-206ENST00000608461 ZNF230Q9UIE0 474 aaPredicted RBP11.36□□□□□ -0.59
HDDC2-206ENST00000608461 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 NCBP2LA6PVI3 153 aaKnown RBP11.35□□□□□ -0.59
HDDC2-206ENST00000608461 BET1O15155 118 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 IGHG2P01859 326 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 VSIG10L2P0DP72 767 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 OR3A3P47888 321 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
HDDC2-206ENST00000608461 HNF4GQ14541 408 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 FBLN7Q53RD9 439 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 IGSF11Q5DX21 431 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 CNIH2Q6PI25 160 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 Q6ZS46 218 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 AP3S1Q92572 193 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 RNF5Q99942 180 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 GINS4Q9BRT9 223 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 ST6GALNAC5Q9BVH7 336 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 AUNIPQ9H7T9 357 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 PLSCR3Q9NRY6 295 aa11.35□□□□□ -0.59
HDDC2-206ENST00000608461 KCNAB3O43448 404 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 RBBP9O75884 186 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 SLC22A5O76082 557 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 APOA1P02647 267 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 CT45A6P0DMU7 189 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 CT45A5P0DMU8 189 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 CT45A7P0DMV0 189 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 GPR12P47775 334 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 GPR107Q5VW38 600 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 MZT2AQ6P582 158 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 H1FOOQ8IZA3 346 aaPredicted RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 FAM71E2Q8N5Q1 922 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 NUDCD2Q8WVJ2 157 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 ABHD14BQ96IU4 210 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 RASL11BQ9BPW5 248 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 PARP12Q9H0J9 701 aaKnown RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 ELF5Q9UKW6 265 aaPredicted RBP11.34□□□□□ -0.59
HDDC2-206ENST00000608461 FBN3Q75N90 2809 aa11.34□□□□□ -0.59
HDDC2-206ENST00000608461 SMIM31A0A1B0GVY4 71 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 ZNF736B4DX44 427 aaPredicted RBP11.33□□□□□ -0.6
HDDC2-206ENST00000608461 SSX5O60225 188 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 FBXO24O75426 580 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 TMBIM6P55061 237 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
HDDC2-206ENST00000608461 HOGA1Q86XE5 327 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 FOXRED2Q8IWF2 684 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 Q8N9W7 124 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 NPBQ8NG41 125 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 RAB2BQ8WUD1 216 aa11.33□□□□□ -0.6
HDDC2-206ENST00000608461 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms