RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ACTBL2Q562R1 376 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
CTSA-216ENST00000607212 ZNF554Q86TJ5 538 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 PPP1R27Q86WC6 154 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 GAPTQ8N292 157 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 TCTEX1D1Q8N7M0 179 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 NPBQ8NG41 125 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
CTSA-216ENST00000607212 CYYR1Q96J86 154 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 PGLYRP3Q96LB9 341 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
CTSA-216ENST00000607212 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 TOLLIPQ9H0E2 274 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 PIPOXQ9P0Z9 390 aa11.5□□□□□ -0.57
CTSA-216ENST00000607212 RRHO14718 337 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 RAB29O14966 203 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 CELP19835 753 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 CX3CL1P78423 397 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 NDPQ00604 133 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 ST3GAL4Q11206 333 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 PYHIN1Q6K0P9 492 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 HAPLN4Q86UW8 402 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 ANKRD13BQ86YJ7 626 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 CDH26Q8IXH8 852 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 MINDY2Q8NBR6 621 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 DERL3Q96Q80 235 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 SULT4A1Q9BR01 284 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 UQCC2Q9BRT2 126 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 FBXO7Q9Y3I1 522 aa11.49□□□□□ -0.57
CTSA-216ENST00000607212 OR5H14A6NHG9 310 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 HSPA12AO43301 675 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 NDUFA3O95167 84 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
CTSA-216ENST00000607212 C6orf141Q5SZD1 244 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 TTC23Q5W5X9 447 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 OR10K2Q6IF99 312 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 ACSM6Q6P461 480 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 C6orf201Q7Z4U5 140 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 THRSPQ92748 146 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 TMEM59Q9BXS4 323 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 METTL1Q9UBP6 276 aaKnown RBP11.48□□□□□ -0.57
CTSA-216ENST00000607212 GHRLQ9UBU3 117 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
CTSA-216ENST00000607212 SOX15O60248 233 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 TRGV3P03979 118 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 UBBP0CG47 229 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 CPEP16870 476 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 MC5RP33032 325 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 HMGN3Q15651 99 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 RBM48Q5RL73 367 aaKnown RBP11.47□□□□□ -0.57
CTSA-216ENST00000607212 GLT8D1Q68CQ7 371 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 LFNGQ8NES3 379 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 GRPEL2Q8TAA5 225 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 GGHQ92820 318 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 ABHD14BQ96IU4 210 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 GAR1Q9NY12 217 aaKnown RBP11.47□□□□□ -0.57
CTSA-216ENST00000607212 SLC23A1Q9UHI7 598 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 STUB1Q9UNE7 303 aa11.47□□□□□ -0.57
CTSA-216ENST00000607212 C13orf42A0A1B0GVH6 325 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 EFCAB10A6NFE3 127 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 FCN1O00602 326 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 LDLRAD4O15165 306 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 RBBP9O75884 186 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 CA2P00918 260 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 WNT4P56705 351 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 RPS16P62249 146 aaKnown RBP11.46□□□□□ -0.57
CTSA-216ENST00000607212 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 AHSA2Q719I0 299 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 DHRSXQ8N5I4 330 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 ISOC1Q96CN7 298 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 PLEKHJ1Q9NW61 149 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 CNOT2Q9NZN8 540 aaKnown RBP11.46□□□□□ -0.57
CTSA-216ENST00000607212 GAB2Q9UQC2 676 aa11.46□□□□□ -0.57
CTSA-216ENST00000607212 ANKRD34BA5PLL1 514 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 H0YJW9 148 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 SLC22A1O15245 554 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 CNIH1O95406 144 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 ARSBP15848 533 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 RCN1Q15293 331 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 MOB1BQ7L9L4 216 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 SVOPQ8N4V2 548 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 DRAXINQ8NBI3 349 aaPredicted RBP11.45□□□□□ -0.58
CTSA-216ENST00000607212 EDARADDQ8WWZ3 215 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 TSNAXQ99598 290 aaKnown RBP11.45□□□□□ -0.58
CTSA-216ENST00000607212 KCNK15Q9H427 330 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 SLA2Q9H6Q3 261 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 ZNF221Q9UK13 617 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 NUBP2Q9Y5Y2 271 aa11.45□□□□□ -0.58
CTSA-216ENST00000607212 APOA2P02652 100 aa11.44□□□□□ -0.58
CTSA-216ENST00000607212 IGHV4-30-4P0DP06 118 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms