RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	HMGN3	Q15651	99 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	UNQ5815/PRO19632	Q6UWF5	114 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	LFNG	Q8NES3	379 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	OR52I1	Q8NGK6	324 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	RHOXF1	Q8NHV9	184 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	LINC00476	Q8WZB0	136 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	ORAI1	Q96D31	301 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	S100A13	Q99584	98 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	FAM103A1	Q9BTL3	118 aa	Known RBP	13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	RETN	Q9HD89	108 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	PEX16	Q9Y5Y5	336 aa		13.89	□□□□□ -0.19
IRF3-231	ENST00000602190	OGG1	O15527	345 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	SNRPB	P14678	240 aa	Known RBP	13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	FUT3	P21217	361 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	DMKN	Q6E0U4	476 aa	Predicted RBP	13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	CDH26	Q8IXH8	852 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	AGMAT	Q9BSE5	352 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	RSRP1	Q9BUV0	290 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	PIPOX	Q9P0Z9	390 aa		13.88	□□□□□ -0.19
IRF3-231	ENST00000602190	TRAV8-7	A0A075B6U6	113 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	SAC3D1	A6NKF1	404 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	ITGB1BP1	O14713	200 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	MAS1	P04201	325 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	CSN3	P07498	182 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	RPS11	P62280	158 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
IRF3-231	ENST00000602190		Q8N402	240 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	SMIM19	Q96E16	107 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	MS4A10	Q96PG2	267 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	FGF20	Q9NP95	211 aa	Predicted RBP	13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	LRRC42	Q9Y546	428 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	CEPT1	Q9Y6K0	416 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	A3GALT2	U3KPV4	340 aa		13.87	□□□□□ -0.19
IRF3-231	ENST00000602190	SHISA3	A0PJX4	238 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	IZUMO1R	A6ND01	250 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	EI24	O14681	340 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	PROP1	O75360	226 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	SPDEF	O95238	335 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	TRGV3	P03979	118 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	MGMT	P16455	207 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	MC5R	P33032	325 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	ALDH3A2	P51648	485 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	LCN12	Q6JVE5	192 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	GLIPR1L1	Q6UWM5	242 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	GTSCR1	Q86UQ5	136 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	POC5	Q8NA72	575 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	OR2AK2	Q8NG84	335 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	OR2K2	Q8NGT1	345 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	GALM	Q96C23	342 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	AMBN	Q9NP70	447 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	KCNIP1	Q9NZI2	227 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	KMT2A	Q03164	3969 aa		13.86	□□□□□ -0.19
IRF3-231	ENST00000602190	TRBV5-7	A0A0A0MS05	114 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	RAB29	O14966	203 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	PDCD6	O75340	191 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	PSG5	Q15238	335 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	RPL39P5	Q59GN2	51 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	ZNF343	Q6P1L6	599 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	ZNF880	Q6PDB4	577 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	LAX1	Q8IWV1	398 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	OR13C5	Q8NGS8	318 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	GHSR	Q92847	366 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	MUL1	Q969V5	352 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	SLC23A1	Q9UHI7	598 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190	WASHC3	Q9Y3C0	194 aa		13.85	□□□□□ -0.19
IRF3-231	ENST00000602190		A0A0G2JLM5	398 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	LALBA	P00709	142 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	CA2	P00918	260 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	RNLS	Q5VYX0	342 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	APH1B	Q8WW43	257 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	PGLYRP3	Q96LB9	341 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	FAM110A	Q9BQ89	295 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	TMED9	Q9BVK6	235 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	PARP12	Q9H0J9	701 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	BANF2	Q9H503	90 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	TUBA4B	Q9H853	241 aa		13.84	□□□□□ -0.19
IRF3-231	ENST00000602190	UBE2QL1	A1L167	161 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	RBMY1B	A6NDE4	496 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	RBMY1E	A6NEQ0	496 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	SLC22A1	O15245	554 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	ST8SIA5	O15466	376 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	NAPSA	O96009	420 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	RBMY1D	P0C7P1	496 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	CD40LG	P29965	261 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	SYNJ2BP	P57105	145 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	ZIK1	Q3SY52	487 aa	Predicted RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190		Q499Y3	187 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	SVOP	Q8N4V2	548 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	ZNF485	Q8NCK3	441 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190		Q96MT0	163 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	SELENOI	Q9C0D9	397 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	METTL1	Q9UBP6	276 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	ADAM30	Q9UKF2	790 aa		13.83	□□□□□ -0.2
IRF3-231	ENST00000602190	OR2A4	O95047	310 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	ETV1	P50549	477 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	PLGLA	Q15195	96 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	OR2G6	Q5TZ20	316 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	ABHD5	Q8WTS1	349 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	FAM53C	Q9NYF3	392 aa		13.82	□□□□□ -0.2
IRF3-231	ENST00000602190	RPL36	Q9Y3U8	105 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms