RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DOCK11Q5JSL3 2073 aa17.03■□□□□ 0.32
SHKBP1-225ENST00000600733 WNT9BO14905 357 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 HAND1O96004 215 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 ARG2P78540 354 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF766Q5HY98 468 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 ZNF826PQ6ZT77 177 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 MBD3L1Q8WWY6 194 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 SIRT7Q9NRC8 400 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 TINAGQ9UJW2 476 aa17.02■□□□□ 0.32
SHKBP1-225ENST00000600733 CXorf65A6NEN9 183 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 CDX4O14627 284 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 CYB5BO43169 146 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 TFF1P04155 84 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 MPV17P39210 176 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 OR3A1P47881 315 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 ZNF808Q8N4W9 903 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 CA5BP1Q8WTZ4 195 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 C5orf30Q96GV9 206 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 OR2D2Q9H210 308 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 IFITM10A6NMD0 228 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 CLDN1O95832 211 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 KRASP01116 189 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 NDUFA6P56556 154 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 SLC38A11Q08AI6 406 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 RBKSQ9H477 322 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 MIOXQ9UGB7 285 aa17.01■□□□□ 0.31
SHKBP1-225ENST00000600733 C12orf77C9JDV5 145 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 J3QW42 95 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 RAC2P15153 192 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 HOXA5P20719 270 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 G6PCP35575 357 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 RPL30P62888 115 aaKnown RBP17■□□□□ 0.31
SHKBP1-225ENST00000600733 SERF2P84101 59 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 TNFRSF9Q07011 255 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 ZNF816Q0VGE8 651 aaPredicted RBP17■□□□□ 0.31
SHKBP1-225ENST00000600733 BEND4Q6ZU67 534 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 ZNF610Q8N9Z0 462 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 TAF15Q92804 592 aaKnown RBP eCLIP17■□□□□ 0.31
SHKBP1-225ENST00000600733 TMPRSS5Q9H3S3 457 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 DOK5Q9P104 306 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 AESQ08117 197 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 TMEM41BQ5BJD5 291 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 HES3Q5TGS1 186 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 DEFB123Q8N688 67 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 ZNF645Q8N7E2 425 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 OR52L2PQ8NGH6 319 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 GMPPAQ96IJ6 420 aaPredicted RBP17■□□□□ 0.31
SHKBP1-225ENST00000600733 OBP2BQ9NPH6 170 aa17■□□□□ 0.31
SHKBP1-225ENST00000600733 MAP1LC3B2A6NCE7 125 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 CEBPZOSA8MTT3 80 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 IQCF6A8MYZ5 107 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 IGKV1D-33P01593 117 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 IGKV1-33P01594 117 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 CD55P08174 381 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 KLF14Q8TD94 323 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 GALMQ96C23 342 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 MAP1LC3BQ9GZQ8 125 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 ZDHHC11Q9H8X9 412 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 KCNIP1Q9NZI2 227 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 TMEM30CPA0ZSE6 113 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 RNF212BA8MTL3 300 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 MLNRO43193 412 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 TRGC2P03986 189 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 SP9P0CG40 484 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 TGFBR3Q03167 851 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 TLE1Q04724 770 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 TMEM14EPQ6UXP3 125 aa16.99■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BKO60814 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BJP06899 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BOP23527 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BBP33778 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BDP58876 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BCP62807 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST2H2BEQ16778 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 SPNS3Q6ZMD2 512 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 RPP25LQ8N5L8 163 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BHQ93079 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BNQ99877 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HIST1H2BMQ99879 126 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 OR51M1Q9H341 326 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 CLN8Q9UBY8 286 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 B4DEV8 164 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HMGB3O15347 200 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 IL2RGP31785 369 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 GABRA6Q16445 453 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 BTNL3Q6UXE8 466 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 Q6ZR03 302 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 TOLLIPQ9H0E2 274 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HES4Q9HCC6 221 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 HSPB7Q9UBY9 170 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 VAX2Q9UIW0 290 aa16.98■□□□□ 0.31
SHKBP1-225ENST00000600733 FAM90A26D6RGX4 464 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 WISP2O76076 250 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 AGFG2O95081 481 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 S1PR2O95136 353 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 HBZP02008 142 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 CDX1P47902 265 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms