RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 THSD7AQ9UPZ6 1657 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 TRAV9-1A0A075B6T8 112 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 C11orf98E9PRG8 122 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 F2RL2O00254 374 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 UBE2G1P62253 170 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
NFKB1-212ENST00000600343 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
NFKB1-212ENST00000600343 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 NAA38Q9BRA0 125 aaKnown RBP8.41□□□□□ -1.06
NFKB1-212ENST00000600343 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
NFKB1-212ENST00000600343 PSG8Q9UQ74 426 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 LTBP3Q9NS15 1303 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 TRBV9A0A0B4J1U6 114 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 C3orf85A0A1B0GTC6 90 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 A0A1W2PR80 420 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 PSMB11A5LHX3 300 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 BRI3O95415 125 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 FRMD6-AS1P0C7T7 363 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 NPPCP23582 126 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 WASP42768 502 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 RPP25LQ8N5L8 163 aaKnown RBP8.41□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
NFKB1-212ENST00000600343 TCF20Q9UGU0 1960 aaKnown RBP8.4□□□□□ -1.06
NFKB1-212ENST00000600343 A0A1W2PPV9 198 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF840PA6NDX5 716 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 J3QR89 54 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 LATO43561 262 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 SRFP11831 508 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 SRIP30626 198 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 SSTR5P35346 364 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 ZNF439Q8NDP4 499 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 OR10AG1Q8NH19 301 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 COMMD5Q9GZQ3 224 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 SPACA6W5XKT8 324 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 IGKV1-8A0A0C4DH67 115 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 CRYAAP02489 173 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 VDAC1P21796 283 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 GATA3P23771 443 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 WDR74Q6RFH5 385 aaPredicted RBP8.4□□□□□ -1.06
NFKB1-212ENST00000600343 LINC00346Q8IVM7 164 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 UBE2ZQ9H832 354 aaPredicted RBP8.4□□□□□ -1.06
NFKB1-212ENST00000600343 HS3ST2Q9Y278 367 aa8.4□□□□□ -1.06
NFKB1-212ENST00000600343 ASAH2BP0C7U1 165 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 CCL2P13500 99 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 CPMP14384 443 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 CD70P32970 193 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 ID3Q02535 119 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 HS3ST3A1Q9Y663 406 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.07
NFKB1-212ENST00000600343 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 NDUFB4O95168 129 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 CELA3AP09093 270 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 ZNF823P16415 610 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 UQCRFS1P47985 274 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 CYB561P49447 251 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 PAX9P55771 341 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 SEC11AP67812 179 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 EBLN2Q6P2I7 272 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 QTRT1Q9BXR0 403 aaKnown RBP8.39□□□□□ -1.07
NFKB1-212ENST00000600343 CTXND1A0A1B0GTU2 59 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 PRSS37A4D1T9 235 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 M0R2Z0 102 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 SLC17A3O00476 420 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 HSBP1O75506 76 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 RHBDL1O75783 438 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 APOA2P02652 100 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 CTLA4P16410 223 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 GPR183P32249 361 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 TBR1Q16650 682 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 SCCPDHQ8NBX0 429 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 PNRC2Q9NPJ4 139 aaKnown RBP8.39□□□□□ -1.07
NFKB1-212ENST00000600343 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
NFKB1-212ENST00000600343 KCNIP1Q9NZI2 227 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 OR1A2Q9Y585 309 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 ANKRD30BLA7E2S9 258 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 DEGS1O15121 323 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 CGAP01215 116 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 HTR1DP28221 377 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 ARL3P36405 182 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 PLA2G5P39877 138 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 LGALS4P56470 323 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 HERV-K104P61576 105 aa8.39□□□□□ -1.07
NFKB1-212ENST00000600343 GNB1P62873 340 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms