RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 LINC00205P59089 165 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 TMEM267Q0VDI3 215 aaPredicted RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 GPR176Q14439 515 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 HMGN3Q15651 99 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 CCDC58Q4VC31 144 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 TRAT1Q6PIZ9 186 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 UNQ5815/PRO19632Q6UWF5 114 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 GLIPR1L1Q6UWM5 242 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 FAM131AQ6UXB0 335 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ANKRD13BQ86YJ7 626 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 SGPP2Q8IWX5 399 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 STX19Q8N4C7 294 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ZNF485Q8NCK3 441 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 LFNGQ8NES3 379 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 OR5AN1Q8NGI8 311 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 OR13C5Q8NGS8 318 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 NEK7Q8TDX7 302 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 APH1BQ8WW43 257 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 MRPL48Q96GC5 212 aaKnown RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 Q96M66 194 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ZNF184Q99676 751 aaPredicted RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 AGMATQ9BSE5 352 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 FAM103A1Q9BTL3 118 aaKnown RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 ELOVL1Q9BW60 279 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 PARP12Q9H0J9 701 aaKnown RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 BANF2Q9H503 90 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ZFAND3Q9H8U3 227 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 RANGRFQ9HD47 186 aaPredicted RBP4.64□□□□□ -1.67
VRK3-220ENST00000600259 RETNQ9HD89 108 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 RAB9BQ9NP90 201 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 SIGLEC8Q9NYZ4 499 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ADAM30Q9UKF2 790 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 ERGIC3Q9Y282 383 aa4.64□□□□□ -1.67
VRK3-220ENST00000600259 KMT2AQ03164 3969 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RBMY1BA6NDE4 496 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 RBMY1EA6NEQ0 496 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 SNTNA6NMZ2 147 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 ZNF785A8K8V0 405 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 H3BNX3 289 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 ITGB1BP1O14713 200 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RBMXL2O75526 392 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 WBP4O75554 376 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 JTBO76095 146 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 BRI3O95415 125 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 BAG2O95816 211 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 MAS1P04201 325 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 IFNA6P05013 189 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 CD2P06729 351 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RBMY1DP0C7P1 496 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 CD37P11049 281 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 ALDH3A2P51648 485 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 TPPP2P59282 170 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RIPK1Q13546 671 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 PSG5Q15238 335 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 SMN1Q16637 294 aaKnown RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 MRGPRG-AS1Q2M3A8 158 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 ACTBL2Q562R1 376 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RPL39P5Q59GN2 51 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 OR2G6Q5TZ20 316 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 DMKNQ6E0U4 476 aaPredicted RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 PYHIN1Q6K0P9 492 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 FAM71F2Q6NXP2 309 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 ZNF880Q6PDB4 577 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 GLDNQ6ZMI3 551 aaPredicted RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 CDH26Q8IXH8 852 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 OR9G4Q8NGQ1 327 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 GHSRQ92847 366 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 MUL1Q969V5 352 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 PGLYRP3Q96LB9 341 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 MYCBPQ99417 103 aaPredicted RBP4.63□□□□□ -1.67
VRK3-220ENST00000600259 SLC29A1Q99808 456 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 RNF5Q99942 180 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 SULT4A1Q9BR01 284 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 SLA2Q9H6Q3 261 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 BABAM2Q9NXR7 383 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 LRRC42Q9Y546 428 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 A3GALT2U3KPV4 340 aa4.63□□□□□ -1.67
VRK3-220ENST00000600259 H0Y980 276 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 RAB29O14966 203 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 PDCD6O75340 191 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 RBBP9O75884 186 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 NAPSAO96009 420 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 CA2P00918 260 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 TRBV12-3P01733 135 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 TRGV3P03979 118 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 IGKV1-16P04430 117 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 TFAP2AP05549 437 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 CRYGBP07316 175 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 MGMTP16455 207 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 FSTP19883 344 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 ZP3P21754 424 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 MC5RP33032 325 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 SYNJ2BPP57105 145 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 PPP3R1P63098 170 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 Q499Y3 187 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 C1orf146Q5VVC0 180 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 ZNF343Q6P1L6 599 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 CBR4Q8N4T8 237 aa4.62□□□□□ -1.67
VRK3-220ENST00000600259 POC5Q8NA72 575 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms