RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 DERL3Q96Q80 235 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 OR14A2Q96R54 314 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 S1PR3Q99500 378 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 SDHCQ99643 169 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-217ENST00000600236 SELENOIQ9C0D9 397 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 SRRQ9GZT4 340 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 GHRLQ9UBU3 117 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 ADAM30Q9UKF2 790 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 TRAV8-7A0A075B6U6 113 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 A0A1W2PPK0 400 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 NOTOA8MTQ0 251 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 PDCD5O14737 125 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 RGS5O15539 181 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 CRTAPO75718 401 aaPredicted RBP9.01□□□□□ -0.97
HIF3A-217ENST00000600236 ELANEP08246 267 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 MGMTP16455 207 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 RAB3BP20337 219 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF137PP52743 207 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 RAB25P57735 213 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 CD69Q07108 199 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF79Q15937 498 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 SFXN4Q6P4A7 337 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF554Q86TJ5 538 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 CENPSQ8N2Z9 138 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 GDPD1Q8N9F7 314 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 Q8N9W7 124 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 ST6GALNAC6Q969X2 333 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 P2RX4Q99571 388 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 CST11Q9H112 138 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 OR2S2Q9NQN1 319 aa9.01□□□□□ -0.97
HIF3A-217ENST00000600236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.01□□□□□ -0.97
HIF3A-217ENST00000600236 WI2-2373I1.2A0A1W2PRP0 233 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 CCL24O00175 119 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 RAMP3O60896 148 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 RGS11O94810 467 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 HBZP02008 142 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 FUT3P21217 361 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 DGCR2P98153 550 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 FOXE3Q13461 319 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 C18orf65Q6ZTR6 163 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 GAPTQ8N292 157 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF439Q8NDP4 499 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 TMEM104Q8NE00 496 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 OR5M8Q8NGP6 311 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 SETD6Q8TBK2 473 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 CMTM3Q96MX0 182 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 BANF2Q9H503 90 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 TAF9BQ9HBM6 251 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 ABRACLQ9P1F3 81 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 JPT1Q9UK76 154 aa9□□□□□ -0.97
HIF3A-217ENST00000600236 UBE2QL1A1L167 161 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 SMIM30A4D0T7 59 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 SLC31A2O15432 143 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 LANCL1O43813 399 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 PDCD6O75340 191 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 PTTG1O95997 202 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 RPLP1P05386 114 aaKnown RBP8.99□□□□□ -0.97
HIF3A-217ENST00000600236 UBBP0CG47 229 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 CDX1P47902 265 aaPredicted RBP8.99□□□□□ -0.97
HIF3A-217ENST00000600236 OR10A3P58181 314 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 KIR2DS1Q14954 304 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 MMDQ15546 238 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 CT45A1Q5HYN5 189 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 CNIH2Q6PI25 160 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 OR1L1Q8NH94 360 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 CT45A3Q8NHU0 189 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 DIRAS2Q96HU8 199 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 Q96M66 194 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 NEDD4LQ96PU5 975 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 ABHD14AQ9BUJ0 271 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF107Q9UII5 783 aaPredicted RBP8.99□□□□□ -0.97
HIF3A-217ENST00000600236 DAPK2Q9UIK4 370 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF580Q9UK33 172 aa8.99□□□□□ -0.97
HIF3A-217ENST00000600236 FABP12A6NFH5 140 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 LINC01548A6NM66 108 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF736B4DX44 427 aaPredicted RBP8.98□□□□□ -0.97
HIF3A-217ENST00000600236 HPGDSO60760 199 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 HLA-DQB1P01920 261 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 IGF1P05019 195 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 CD37P11049 281 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 RCC1P18754 421 aaPredicted RBP8.98□□□□□ -0.97
HIF3A-217ENST00000600236 SRMP19623 302 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 ZNF134P52741 427 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 SCAND1P57086 179 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 DEFA1P59665 94 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 DEFA3P59666 94 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 HTD2P86397 168 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 TRIM16LQ309B1 348 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 MORN2Q502X0 79 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 IDNKQ5T6J7 187 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 C9orf66Q5T8R8 295 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 GLT8D1Q68CQ7 371 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 LCNL1Q6ZST4 164 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 LRRTM1Q86UE6 522 aa8.98□□□□□ -0.97
HIF3A-217ENST00000600236 FAM71E2Q8N5Q1 922 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms