RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 H7C2Y5 167 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
LIG1-218ENST00000599322 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
LIG1-218ENST00000599322 OR5H8P0DN80 308 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 HIST1H1DP16402 221 aaKnown RBP11.21□□□□□ -0.61
LIG1-218ENST00000599322 CD36P16671 472 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 CD33P20138 364 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 VDAC1P21796 283 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 GPR12P47775 334 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 PLGLAQ15195 96 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 ZNF833PQ6ZTB9 187 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 Q8N6K4 173 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 OR10J5Q8NHC4 309 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 WIPF2Q8TF74 440 aaPredicted RBP11.21□□□□□ -0.61
LIG1-218ENST00000599322 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 MRPL20Q9BYC9 149 aaKnown RBP11.21□□□□□ -0.61
LIG1-218ENST00000599322 ZFP57Q9NU63 452 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
LIG1-218ENST00000599322 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 FOXI3A8MTJ6 420 aaPredicted RBP11.2□□□□□ -0.62
LIG1-218ENST00000599322 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 ZNF736B4DX44 427 aaPredicted RBP11.2□□□□□ -0.62
LIG1-218ENST00000599322 FABP7O15540 132 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 SCTP09683 121 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 GNB3P16520 340 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 SLC6A1P30531 599 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 OR3A3P47888 321 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 ACTBP60709 375 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 PITPNAQ00169 270 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 CBX3Q13185 183 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 PNLIPRP3Q17RR3 467 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 FBLN7Q53RD9 439 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 STPG2Q8N412 459 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 Q8N9W7 124 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 GINS4Q9BRT9 223 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 OR51E2Q9H255 320 aa11.2□□□□□ -0.62
LIG1-218ENST00000599322 ZNF107Q9UII5 783 aaPredicted RBP11.2□□□□□ -0.62
LIG1-218ENST00000599322 SMIM30A4D0T7 59 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 BET1O15155 118 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 NBR2O15453 112 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 TMEM127O75204 238 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 RBBP9O75884 186 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 APOA2P02652 100 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 SLC2A2P11168 524 aaPredicted RBP11.19□□□□□ -0.62
LIG1-218ENST00000599322 SDC2P34741 201 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 SCAND1P57086 179 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 MXD1Q05195 221 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 CDNFQ49AH0 187 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 CXorf66Q5JRM2 361 aaPredicted RBP11.19□□□□□ -0.62
LIG1-218ENST00000599322 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 SFXN4Q6P4A7 337 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 C5orf24Q7Z6I8 188 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
LIG1-218ENST00000599322 C11orf54Q9H0W9 315 aaPredicted RBP11.19□□□□□ -0.62
LIG1-218ENST00000599322 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 OR1A1Q9P1Q5 309 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 WASHC3Q9Y3C0 194 aa11.19□□□□□ -0.62
LIG1-218ENST00000599322 SHISA3A0PJX4 238 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 RAB27BO00194 218 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 DIRAS3O95661 229 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 FCGR3AP08637 254 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 GNG2P59768 71 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
LIG1-218ENST00000599322 LIN54Q6MZP7 749 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 ODF3L1Q8IXM7 274 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.18□□□□□ -0.62
LIG1-218ENST00000599322 RNF5Q99942 180 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 PLSCR3Q9NRY6 295 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 ETV7Q9Y603 341 aa11.18□□□□□ -0.62
LIG1-218ENST00000599322 A0A0B4J203 849 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 MFNGO00587 321 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 TFAP2AP05549 437 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 DTYMKP23919 212 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 F2RL1P55085 397 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
LIG1-218ENST00000599322 MOGAT2Q3SYC2 334 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 IDNKQ5T6J7 187 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 FAM131AQ6UXB0 335 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 FAM71E2Q8N5Q1 922 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 CYYR1Q96J86 154 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 TSNAXQ99598 290 aaKnown RBP11.17□□□□□ -0.62
LIG1-218ENST00000599322 GPR61Q9BZJ8 451 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 DIABLOQ9NR28 239 aa11.17□□□□□ -0.62
LIG1-218ENST00000599322 AIREO43918 545 aa11.16□□□□□ -0.62
LIG1-218ENST00000599322 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms