RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	RCC2	Q9P258	522 aa	Known RBP	11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	AK6	Q9Y3D8	172 aa	Known RBP	11.47	□□□□□ -0.57
IRF3-223	ENST00000599223	TRAV8-7	A0A075B6U6	113 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	SHISA3	A0PJX4	238 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	FAM25A	B3EWG3	89 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	FAM25C	B3EWG5	89 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	FAM25G	B3EWG6	89 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	CTDSP2	O14595	271 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	ORC5	O43913	435 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	MOS	P00540	346 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	MAS1	P04201	325 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	IGFBP3	P17936	291 aa	Predicted RBP	11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	GZMH	P20718	246 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	CD40LG	P29965	261 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	BDKRB2	P30411	391 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	ZNF134	P52741	427 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	ASPHD1	Q5U4P2	390 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	LINC00596	Q86U02	117 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	OR10V1	Q8NGI7	309 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	NEK7	Q8TDX7	302 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	DIRAS2	Q96HU8	199 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223		U3KQK5	164 aa		11.46	□□□□□ -0.57
IRF3-223	ENST00000599223	RYR2	Q92736	4967 aa		11.46	□□□□□ -0.58
IRF3-223	ENST00000599223	SACS	Q9NZJ4	4579 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	SEC14L6	B5MCN3	397 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	IGHG4	P01861	327 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	CSTB	P04080	98 aa	Known RBP	11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	SLC2A2	P11168	524 aa	Predicted RBP	11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	PSMB8	P28062	276 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	CD1B	P29016	333 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	TNFSF8	P32971	234 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	ETV6	P41212	452 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	CDX1	P47902	265 aa	Predicted RBP	11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	PPP5C	P53041	499 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	OR10A3	P58181	314 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	GNMT	Q14749	295 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	KIR2DS1	Q14954	304 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	CT45A1	Q5HYN5	189 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	SLC25A48	Q6ZT89	311 aa	Known RBP	11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	C5orf24	Q7Z6I8	188 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	OR5M8	Q8NGP6	311 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	OR4K15	Q8NH41	348 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	OR1L1	Q8NH94	360 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	CT45A3	Q8NHU0	189 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	MYOZ3	Q8TDC0	251 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	C4orf3	Q8WVX3	66 aa		11.45	□□□□□ -0.58
IRF3-223	ENST00000599223	FABP12	A6NFH5	140 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	IFITM5	A6NNB3	132 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	RAMP3	O60896	148 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	ELANE	P08246	267 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	RCC1	P18754	421 aa	Predicted RBP	11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	PTBP1	P26599	531 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	IL3RA	P26951	378 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	ECI1	P42126	302 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	SCAND1	P57086	179 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	C9orf66	Q5T8R8	295 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	FAM131A	Q6UXB0	335 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	CCDC190	Q86UF4	302 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	LAX1	Q8IWV1	398 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	GAPT	Q8N292	157 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	PRR18	Q8N4B5	295 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	SAMD12	Q8N8I0	201 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	CMTM3	Q96MX0	182 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	ASCL2	Q99929	193 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	KLK15	Q9H2R5	256 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	GNB4	Q9HAV0	340 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	GNG12	Q9UBI6	72 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	RABL2B	Q9UNT1	228 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	ETV7	Q9Y603	341 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	SORL1	Q92673	2214 aa		11.44	□□□□□ -0.58
IRF3-223	ENST00000599223	HPGDS	O60760	199 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	HBZ	P02008	142 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	IGF1	P05019	195 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	GTF2F2	P13984	249 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	VDAC1	P21796	283 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	CNTFR	P26992	372 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	KIAA0141	Q14154	515 aa	Predicted RBP	11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	RAB11B	Q15907	218 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223		Q3ZCU0	254 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	HES5	Q5TA89	166 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	RAB12	Q6IQ22	244 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	LRRTM1	Q86UE6	522 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	MFSD4A	Q8N468	514 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	RITA1	Q96K30	269 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	RASL11B	Q9BPW5	248 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223	GON7	Q9BXV9	100 aa		11.43	□□□□□ -0.58
IRF3-223	ENST00000599223		G3V318	75 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223		J3QRK9	145 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	TXNL1	O43396	289 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	APOA1	P02647	267 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	GNB1	P62873	340 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	UBE2NL	Q5JXB2	153 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	SIGIRR	Q6IA17	410 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	NR2C2AP	Q86WQ0	139 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	ODF3L1	Q8IXM7	274 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	JAGN1	Q8N5M9	183 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	OR8H1	Q8NGG4	311 aa		11.42	□□□□□ -0.58
IRF3-223	ENST00000599223	OR6M1	Q8NGM8	313 aa		11.42	□□□□□ -0.58

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