RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 C11orf44Q8N8P7 122 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 EDARADDQ8WWZ3 215 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 PHF21AQ96BD5 680 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
UPF1-205ENST00000598209 MRPS26Q9BYN8 205 aaKnown RBP11.02□□□□□ -0.65
UPF1-205ENST00000598209 WNT10AQ9GZT5 417 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.65
UPF1-205ENST00000598209 SPATA2Q9UM82 520 aa11.02□□□□□ -0.65
UPF1-205ENST00000598209 M0QZ24 198 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 RAB29O14966 203 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 BET1O15155 118 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 FGF16O43320 207 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 DTYMKP23919 212 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 VBP1P61758 197 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
UPF1-205ENST00000598209 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 FAM71F2Q6NXP2 309 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 NUDCD2Q8WVJ2 157 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 RBMXL1Q96E39 390 aaKnown RBP11.01□□□□□ -0.65
UPF1-205ENST00000598209 ABHD14BQ96IU4 210 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 S1PR3Q99500 378 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 NABP2Q9BQ15 211 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 AGMATQ9BSE5 352 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 RDH8Q9NYR8 311 aa11.01□□□□□ -0.65
UPF1-205ENST00000598209 TRAV18A0A075B6X5 111 aa11□□□□□ -0.65
UPF1-205ENST00000598209 IGKV1D-8A0A087WSZ0 117 aa11□□□□□ -0.65
UPF1-205ENST00000598209 A0A0A6YYH2 397 aa11□□□□□ -0.65
UPF1-205ENST00000598209 A6NJ64 397 aa11□□□□□ -0.65
UPF1-205ENST00000598209 NCBP2LA6PVI3 153 aaKnown RBP11□□□□□ -0.65
UPF1-205ENST00000598209 DIRAS3O95661 229 aa11□□□□□ -0.65
UPF1-205ENST00000598209 GNG2P59768 71 aa11□□□□□ -0.65
UPF1-205ENST00000598209 PITPNAQ00169 270 aa11□□□□□ -0.65
UPF1-205ENST00000598209 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
UPF1-205ENST00000598209 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
UPF1-205ENST00000598209 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
UPF1-205ENST00000598209 Q6ZS49 121 aa11□□□□□ -0.65
UPF1-205ENST00000598209 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
UPF1-205ENST00000598209 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
UPF1-205ENST00000598209 SLC25A46Q96AG3 418 aa11□□□□□ -0.65
UPF1-205ENST00000598209 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
UPF1-205ENST00000598209 NAA50Q9GZZ1 169 aaKnown RBP11□□□□□ -0.65
UPF1-205ENST00000598209 TOLLIPQ9H0E2 274 aa11□□□□□ -0.65
UPF1-205ENST00000598209 GHITMQ9H3K2 345 aa11□□□□□ -0.65
UPF1-205ENST00000598209 RNF150Q9ULK6 438 aa11□□□□□ -0.65
UPF1-205ENST00000598209 WNK1Q9H4A3 2382 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 TRBV6-7A0A0A0MS04 114 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 FBXO24O75426 580 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 ANKRD13BQ86YJ7 626 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 Q8N9W7 124 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 ST6GALNAC5Q9BVH7 336 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 DCSTAMPQ9H295 470 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 DIABLOQ9NR28 239 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 PLSCR3Q9NRY6 295 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 ZNF221Q9UK13 617 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 TRRAPQ9Y4A5 3859 aa10.99□□□□□ -0.65
UPF1-205ENST00000598209 SSX5O60225 188 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 GABARAPO95166 117 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 TFAP2AP05549 437 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 CT45A6P0DMU7 189 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 CT45A5P0DMU8 189 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 CT45A7P0DMV0 189 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 CD28P10747 220 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 GPR12P47775 334 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 ALDH3B2P48448 385 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 F2RL1P55085 397 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 C2orf68Q2NKX9 166 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 UBE2NLQ5JXB2 153 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 GPR107Q5VW38 600 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 TREML4Q6UXN2 200 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 GLDNQ6ZMI3 551 aaPredicted RBP10.98□□□□□ -0.65
UPF1-205ENST00000598209 CENPVQ7Z7K6 275 aaPredicted RBP10.98□□□□□ -0.65
UPF1-205ENST00000598209 OR8H1Q8NGG4 311 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
UPF1-205ENST00000598209 GINS4Q9BRT9 223 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 ABCG5Q9H222 651 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 LIN7CQ9NUP9 197 aaKnown RBP10.98□□□□□ -0.65
UPF1-205ENST00000598209 FBN3Q75N90 2809 aa10.98□□□□□ -0.65
UPF1-205ENST00000598209 PROP1O75360 226 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 TSPAN15O95858 294 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 IGHG2P01859 326 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 ACTBP60709 375 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 MMDQ15546 238 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 CTF1Q16619 201 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 FAM131AQ6UXB0 335 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 GPR141Q7Z602 305 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 SLC35E3Q7Z769 313 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 FAM71E2Q8N5Q1 922 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 SAMD12Q8N8I0 201 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 OR5AU1Q8NGC0 362 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 S100A16Q96FQ6 103 aaKnown RBP10.97□□□□□ -0.65
UPF1-205ENST00000598209 RASL11BQ9BPW5 248 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 AUNIPQ9H7T9 357 aa10.97□□□□□ -0.65
UPF1-205ENST00000598209 OR5H14A6NHG9 310 aa10.96□□□□□ -0.65
UPF1-205ENST00000598209 H0YJW9 148 aa10.96□□□□□ -0.65
UPF1-205ENST00000598209 XRCC3O43542 346 aa10.96□□□□□ -0.65
UPF1-205ENST00000598209 CSF1P09603 554 aa10.96□□□□□ -0.65
UPF1-205ENST00000598209 OR8U9P0C7N5 309 aa10.96□□□□□ -0.65
UPF1-205ENST00000598209 CNTFRP26992 372 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms