RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 TMEM272A0A1B0GTI8 110 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 ITGB1BP1O14713 200 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 PDCD5O14737 125 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 RAB29O14966 203 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 ATP6V1G2O95670 118 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 IGF1P05019 195 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 ELANEP08246 267 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 SLC2A2P11168 524 aaPredicted RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 ZBTB25P24278 435 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CNTFRP26992 372 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CFHR3Q02985 330 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 FOXE3Q13461 319 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CXorf66Q5JRM2 361 aaPredicted RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 CD200R1LQ6Q8B3 271 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 OR56B1Q8NGI3 324 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 ABHD14BQ96IU4 210 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 P2RX4Q99571 388 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 CMSS1Q9BQ75 279 aaKnown RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 AGMATQ9BSE5 352 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 C11orf54Q9H0W9 315 aaPredicted RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 GHITMQ9H3K2 345 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 ZNF107Q9UII5 783 aaPredicted RBP11.82□□□□□ -0.52
LIG1-215ENST00000597901 MGAT4AQ9UM21 535 aa11.82□□□□□ -0.52
LIG1-215ENST00000597901 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 MRPS14O60783 128 aaKnown RBP11.81□□□□□ -0.52
LIG1-215ENST00000597901 IGHG4P01861 327 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 VDAC1P21796 283 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
LIG1-215ENST00000597901 OR10A3P58181 314 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 KRTAP10-11P60412 298 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 RPL39P5Q59GN2 51 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 LIN54Q6MZP7 749 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 RNF152Q8N8N0 203 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 NPBQ8NG41 125 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 KCTD7Q96MP8 289 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 CHCHD6Q9BRQ6 235 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 NDUFB11Q9NX14 153 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 RNF150Q9ULK6 438 aa11.81□□□□□ -0.52
LIG1-215ENST00000597901 IFITM5A6NNB3 132 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 CCL24O00175 119 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 NBR2O15453 112 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 HSPA12AO43301 675 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 PROP1O75360 226 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 MC5RP33032 325 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 PTX4Q96A99 478 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 C12orf4Q9NQ89 552 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 KCNK7Q9Y2U2 307 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
LIG1-215ENST00000597901 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 IGKV1-6A0A0C4DH72 117 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 OR5H8P0DN80 308 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 GALP22466 123 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
LIG1-215ENST00000597901 GABARAPL2P60520 117 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 MOGAT2Q3SYC2 334 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 FAM131AQ6UXB0 335 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 GLDNQ6ZMI3 551 aaPredicted RBP11.79□□□□□ -0.52
LIG1-215ENST00000597901 SPARTQ8N0X7 666 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 EDARADDQ8WWZ3 215 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 MCRIP2Q9BUT9 160 aaKnown RBP11.79□□□□□ -0.52
LIG1-215ENST00000597901 KIAA1456Q9P272 454 aa11.79□□□□□ -0.52
LIG1-215ENST00000597901 OR5H14A6NHG9 310 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 G3V318 75 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 H0YJW9 148 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 NDUFA3O95167 84 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 CD3GP09693 182 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 RAB3BP20337 219 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 MYL9P24844 172 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 PSMB8P28062 276 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
LIG1-215ENST00000597901 EGFEM1PQ0D2K5 195 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 UBE2UQ5VVX9 321 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 C22orf42Q6IC83 251 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 OR5AN1Q8NGI8 311 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 OR10R2Q8NGX6 335 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 YTHDF1Q9BYJ9 559 aaKnown RBP11.78□□□□□ -0.52
LIG1-215ENST00000597901 GPR61Q9BZJ8 451 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
LIG1-215ENST00000597901 H7C2Y5 167 aa11.77□□□□□ -0.53
LIG1-215ENST00000597901 K7EIL1 84 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms