RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 THRSPQ92748 146 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 MRPS24Q96EL2 167 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 MGLLQ99685 303 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 SULT4A1Q9BR01 284 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 ZNF251Q9BRH9 671 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 JPT1Q9UK76 154 aa9.38□□□□□ -0.91
SOX2-OT-228ENST00000597828 A0A1W2PN81 502 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM90A10PA6NDY2 464 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM90A7PA6NKC0 464 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM90A23PA8MXZ1 464 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 OR8U8P0C7N1 319 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 PSMB9P28065 219 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 CHRNA7P36544 502 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 HMGN3Q15651 99 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 TBCEQ15813 527 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 C5orf64Q2M2E5 130 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 C19orf54Q5BKX5 351 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM27D1Q5T7N8 215 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 TMEM65Q6PI78 240 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM131AQ6UXB0 335 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 GLDNQ6ZMI3 551 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 NICN1Q9BSH3 213 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 FBXL15Q9H469 300 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 ACOT13Q9NPJ3 140 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 VSIG4Q9Y279 399 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 A3GALT2U3KPV4 340 aa9.37□□□□□ -0.91
SOX2-OT-228ENST00000597828 RYR2Q92736 4967 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 A0A087WW49 117 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 OVOL1O14753 267 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 YPEL1O60688 119 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 CA11O75493 328 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 NDUFA3O95167 84 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 MAPK3P27361 379 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 CHATP28329 748 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 RAB9AP51151 201 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 RUNX1Q01196 453 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 MLLT11Q13015 90 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 RPL39P5Q59GN2 51 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 STEAP3Q658P3 488 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 C6orf201Q7Z4U5 140 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 NKAIN3Q8N8D7 197 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 IL1F10Q8WWZ1 152 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 DLX4Q92988 240 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 YPEL2Q96QA6 119 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 LYSTQ99698 3801 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAM103A1Q9BTL3 118 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 GAB2Q9UQC2 676 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
SOX2-OT-228ENST00000597828 SAP30O75446 220 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 SPNP16150 400 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 PSMA1P25786 263 aaKnown RBP9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 HTD2P86397 168 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 TPBGQ13641 420 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 NEDD8Q15843 81 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 LIPKQ5VXJ0 399 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 CDH26Q8IXH8 852 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 MINDY2Q8NBR6 621 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 NPBQ8NG41 125 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 OR2AK2Q8NG84 335 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 SETD6Q8TBK2 473 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 GALMQ96C23 342 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 ABHD14BQ96IU4 210 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 FAAP24Q9BTP7 215 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 TMED9Q9BVK6 235 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 GAR1Q9NY12 217 aaKnown RBP9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
SOX2-OT-228ENST00000597828 A0A0A6YYD4 124 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 TRIM64CA6NLI5 447 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 FCN1O00602 326 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 GLAP06280 429 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 CT45A6P0DMU7 189 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 CT45A5P0DMU8 189 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 CT45A7P0DMV0 189 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 CPEP16870 476 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 HTR2CP28335 458 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 UNC119Q13432 240 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 ACSM3Q53FZ2 586 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 UBE2UQ5VVX9 321 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 ZNF554Q86TJ5 538 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 ABHD5Q8WTS1 349 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 TMEM203Q969S6 136 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 CHCHD6Q9BRQ6 235 aa9.34□□□□□ -0.91
SOX2-OT-228ENST00000597828 UQCC2Q9BRT2 126 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms