RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ARHGAP5-AS1Q96IT6 56 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 BCL7BQ9BQE9 202 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 PECRQ9BY49 303 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
TGFB1-202ENST00000597453 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
TGFB1-202ENST00000597453 C12orf4Q9NQ89 552 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 AK3Q9UIJ7 227 aa11.94□□□□□ -0.5
TGFB1-202ENST00000597453 METTL21EPA6NDL7 271 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 ZNF736B4DX44 427 aaPredicted RBP11.93□□□□□ -0.5
TGFB1-202ENST00000597453 TMEM127O75204 238 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 CLEC2LP0C7M8 214 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 TMBIM6P55061 237 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 HMGN3Q15651 99 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 CLVS1Q8IUQ0 354 aaPredicted RBP11.93□□□□□ -0.5
TGFB1-202ENST00000597453 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 STPG2Q8N412 459 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 PRR18Q8N4B5 295 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 OR10R2Q8NGX6 335 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 OR1L1Q8NH94 360 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
TGFB1-202ENST00000597453 RAB3CQ96E17 227 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 JPT1Q9UK76 154 aa11.93□□□□□ -0.5
TGFB1-202ENST00000597453 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 NUDT19A8MXV4 375 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 RAB27BO00194 218 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 GPR12P47775 334 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 SLC35B1P78383 322 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 HTD2P86397 168 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 DCTN2Q13561 401 aaKnown RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 MOGAT2Q3SYC2 334 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 TGIF2LXQ8IUE1 241 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 FOXRED2Q8IWF2 684 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 Q8N9W7 124 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 GALMQ96C23 342 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 P2RX4Q99571 388 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 HDHD3Q9BSH5 251 aaPredicted RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 FUNDC2Q9BWH2 189 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 LIN7CQ9NUP9 197 aaKnown RBP11.92□□□□□ -0.5
TGFB1-202ENST00000597453 ABRACLQ9P1F3 81 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 GNG12Q9UBI6 72 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 MGAT4AQ9UM21 535 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
TGFB1-202ENST00000597453 MFNGO00587 321 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
TGFB1-202ENST00000597453 TGFBR1P36897 503 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 ZNF134P52741 427 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 DEFB121Q5J5C9 76 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
TGFB1-202ENST00000597453 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 OR10V1Q8NGI7 309 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 LGALS14Q8TCE9 139 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 CMSS1Q9BQ75 279 aaKnown RBP11.91□□□□□ -0.5
TGFB1-202ENST00000597453 ATG5Q9H1Y0 275 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 ABCG5Q9H222 651 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 OR2S2Q9NQN1 319 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 ETV7Q9Y603 341 aa11.91□□□□□ -0.5
TGFB1-202ENST00000597453 NBEAL2Q6ZNJ1 2754 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 AP4M1O00189 453 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 SCGNO76038 276 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
TGFB1-202ENST00000597453 IL3RAP26951 378 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 CD1BP29016 333 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 MYCNOSP40205 109 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 LSM3P62310 102 aaKnown RBP11.9□□□□□ -0.5
TGFB1-202ENST00000597453 MRPS15P82914 257 aaKnown RBP11.9□□□□□ -0.5
TGFB1-202ENST00000597453 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 MORN2Q502X0 79 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 CT45A1Q5HYN5 189 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 LY6G6FQ5SQ64 297 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 IDNKQ5T6J7 187 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 STEAP3Q658P3 488 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 LINC00299Q6ZSB3 139 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 ZNF695Q8IW36 515 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 COMMD1Q8N668 190 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 CT45A3Q8NHU0 189 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 SETD6Q8TBK2 473 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 RAB2BQ8WUD1 216 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 RAX2Q96IS3 184 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 S1PR3Q99500 378 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 Q9N2K0 584 aa11.9□□□□□ -0.5
TGFB1-202ENST00000597453 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.9□□□□□ -0.5
TGFB1-202ENST00000597453 H3BMQ9 156 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 YPEL1O60688 119 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 RGS11O94810 467 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 MOSP00540 346 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 CD3GP09693 182 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 GNB3P16520 340 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 SLC6A1P30531 599 aa11.89□□□□□ -0.51
TGFB1-202ENST00000597453 ZNF137PP52743 207 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms