RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZBTB25P24278 435 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
USE1-207ENST00000596136 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
USE1-207ENST00000596136 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 STPG2Q8N412 459 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 COMMD1Q8N668 190 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 SETD6Q8TBK2 473 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
USE1-207ENST00000596136 C11orf54Q9H0W9 315 aaPredicted RBP10.29□□□□□ -0.76
USE1-207ENST00000596136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.29□□□□□ -0.76
USE1-207ENST00000596136 SSR3Q9UNL2 185 aa10.29□□□□□ -0.76
USE1-207ENST00000596136 TGP01266 2768 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 A0A0B4J203 849 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 METTL21EPA6NDL7 271 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 PROP1O75360 226 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 CT45A7P0DMV0 189 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 SLC2A2P11168 524 aaPredicted RBP10.28□□□□□ -0.76
USE1-207ENST00000596136 HIST1H1DP16402 221 aaKnown RBP10.28□□□□□ -0.76
USE1-207ENST00000596136 GADD45AP24522 165 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 CEACAM6P40199 344 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 Q6ZS49 121 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 NPBQ8NG41 125 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 OR4A4PQ8NGN8 299 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 RBMXL1Q96E39 390 aaKnown RBP10.28□□□□□ -0.76
USE1-207ENST00000596136 RITA1Q96K30 269 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 OR51E2Q9H255 320 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 ZFP57Q9NU63 452 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 OR1A1Q9P1Q5 309 aa10.28□□□□□ -0.76
USE1-207ENST00000596136 G3V4G9 280 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 NDUFA3O95167 84 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 IGF1P05019 195 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 FCGR3AP08637 254 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 CD3GP09693 182 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 GNB3P16520 340 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 SOX6P35712 828 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 SERPINB10P48595 397 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 ACTBP60709 375 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 SLC35B1P78383 322 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 CFHR3Q02985 330 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 ARL6IP1Q15041 203 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 RNF152Q8N8N0 203 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 OR5AN1Q8NGI8 311 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 PHF21AQ96BD5 680 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 KCTD7Q96MP8 289 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 CHCHD6Q9BRQ6 235 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 GON7Q9BXV9 100 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 LINC00527Q9UJ94 153 aa10.27□□□□□ -0.77
USE1-207ENST00000596136 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 A0A1W2PRX2 142 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 OR5H14A6NHG9 310 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 FABP7O15540 132 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 HSPA12AO43301 675 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 HLA-DRB1P01911 266 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 CD36P16671 472 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 SLC6A1P30531 599 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 MC5RP33032 325 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 SDC2P34741 201 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 SCAND1P57086 179 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 RPL23AP62750 156 aaKnown RBP10.26□□□□□ -0.77
USE1-207ENST00000596136 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 MMDQ15546 238 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 PNLIPRP3Q17RR3 467 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 RPL39P5Q59GN2 51 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 TEX38Q6PEX7 206 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 C1QL4Q86Z23 238 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 ABHD14BQ96IU4 210 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 RNF5Q99942 180 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 CENPOQ9BU64 300 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 RDH8Q9NYR8 311 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
USE1-207ENST00000596136 SMIM30A4D0T7 59 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 H0YJW9 148 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 NBR2O15453 112 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 RBBP9O75884 186 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 GSTT2P0CG29 244 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 GSTT2BP0CG30 244 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 PF4V1P10720 104 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 DTYMKP23919 212 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 CNTFRP26992 372 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
USE1-207ENST00000596136 NEDD8Q15843 81 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 C5orf64Q2M2E5 130 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 FAM131AQ6UXB0 335 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.25□□□□□ -0.77
USE1-207ENST00000596136 ATG5Q9H1Y0 275 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 DAPK2Q9UIK4 370 aa10.25□□□□□ -0.77
USE1-207ENST00000596136 TRIM64CA6NLI5 447 aa10.24□□□□□ -0.77
USE1-207ENST00000596136 RRP9O43818 475 aaKnown RBP10.24□□□□□ -0.77
USE1-207ENST00000596136 TMEM127O75204 238 aa10.24□□□□□ -0.77
USE1-207ENST00000596136 SCGNO76038 276 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms