RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 ABCG5Q9H222 651 aa12.84□□□□□ -0.35
TRIM28-206ENST00000595974 OR1A1Q9P1Q5 309 aa12.84□□□□□ -0.35
TRIM28-206ENST00000595974 DAPK2Q9UIK4 370 aa12.84□□□□□ -0.35
TRIM28-206ENST00000595974 NOTCH3Q9UM47 2321 aa12.84□□□□□ -0.35
TRIM28-206ENST00000595974 MEGF8Q7Z7M0 2845 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 SCGNO76038 276 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 DIRAS3O95661 229 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 GNB3P16520 340 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 OR3A3P47888 321 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 SERPINB10P48595 397 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 FOXRED2Q8IWF2 684 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 PARP12Q9H0J9 701 aaKnown RBP12.83□□□□□ -0.36
TRIM28-206ENST00000595974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM28-206ENST00000595974 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.36
TRIM28-206ENST00000595974 A0A075B6Q4 140 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 IGKV1-6A0A0C4DH72 117 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 FABP7O15540 132 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 KCNAB3O43448 404 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 CEACAM6P40199 344 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 GPR12P47775 334 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 SCAND1P57086 179 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 MXD1Q05195 221 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 MMDQ15546 238 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 LGALS14Q8TCE9 139 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 RASL11BQ9BPW5 248 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF251Q9BRH9 671 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 AGMATQ9BSE5 352 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
TRIM28-206ENST00000595974 TSSC4Q9Y5U2 329 aaPredicted RBP12.82□□□□□ -0.36
TRIM28-206ENST00000595974 TCRBV4S1A1TA0A5B7 111 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 AP4M1O00189 453 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 SNRPBP14678 240 aaKnown RBP12.81□□□□□ -0.36
TRIM28-206ENST00000595974 TALDO1P37837 337 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRIM28-206ENST00000595974 TCTEX1D4Q5JR98 221 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 C10orf99Q6UWK7 81 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 ABHD14BQ96IU4 210 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 CENPOQ9BU64 300 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 TOLLIPQ9H0E2 274 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-206ENST00000595974 RNF167Q9H6Y7 350 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 ETV7Q9Y603 341 aa12.81□□□□□ -0.36
TRIM28-206ENST00000595974 OR5H14A6NHG9 310 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 TMEM127O75204 238 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 CLEC2LP0C7M8 214 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 DTYMKP23919 212 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 SOX6P35712 828 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 F2RL1P55085 397 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 ACTBP60709 375 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 SLC35B1P78383 322 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 RPL39P5Q59GN2 51 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 Q6ZS49 121 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 STPG2Q8N412 459 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 NOL4LQ96MY1 436 aaPredicted RBP12.8□□□□□ -0.36
TRIM28-206ENST00000595974 RHBDL2Q9NX52 303 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 RDH8Q9NYR8 311 aa12.8□□□□□ -0.36
TRIM28-206ENST00000595974 TRBV6-7A0A0A0MS04 114 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 NBR2O15453 112 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 RRP9O43818 475 aaKnown RBP12.79□□□□□ -0.36
TRIM28-206ENST00000595974 GSTP1P09211 210 aaKnown RBP12.79□□□□□ -0.36
TRIM28-206ENST00000595974 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 FAM131AQ6UXB0 335 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.79□□□□□ -0.36
TRIM28-206ENST00000595974 OR10J5Q8NHC4 309 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
TRIM28-206ENST00000595974 TRIM64CA6NLI5 447 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 BET1O15155 118 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 AIREO43918 545 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 GSTT2BP0CG30 244 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 CT45A6P0DMU7 189 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 CT45A5P0DMU8 189 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 CT45A7P0DMV0 189 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 PF4V1P10720 104 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 MC5RP33032 325 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 PITPNAQ00169 270 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 IGSF11Q5DX21 431 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 IDNKQ5T6J7 187 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 HACD4Q5VWC8 232 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 MAFIPQ8WZ33 124 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 RBMXL1Q96E39 390 aaKnown RBP12.78□□□□□ -0.36
TRIM28-206ENST00000595974 YIPF6Q96EC8 236 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 HSPB9Q9BQS6 159 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 KIAA1456Q9P272 454 aa12.78□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
TRIM28-206ENST00000595974 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
TRIM28-206ENST00000595974 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms