RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 PIPOXQ9P0Z9 390 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 ZNF736B4DX44 427 aaPredicted RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 TFAP2AP05549 437 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 GNG2P59768 71 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 PITPNAQ00169 270 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 CTF1Q16619 201 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 TMEM95Q3KNT9 176 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 ARSJQ5FYB0 599 aaPredicted RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 GPR141Q7Z602 305 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 Q8N6K4 173 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 OR2T10Q8NGZ9 312 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 ABHD14BQ96IU4 210 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 NABP2Q9BQ15 211 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 AGMATQ9BSE5 352 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 TOLLIPQ9H0E2 274 aa11.6□□□□□ -0.55
VRK3-206ENST00000594090 C11orf54Q9H0W9 315 aaPredicted RBP11.6□□□□□ -0.55
VRK3-206ENST00000594090 TRAV18A0A075B6X5 111 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 SH2D7A6NKC9 451 aaPredicted RBP11.59□□□□□ -0.55
VRK3-206ENST00000594090 RAB29O14966 203 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 BET1O15155 118 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 FGF16O43320 207 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 DIRAS3O95661 229 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 VSIG10L2P0DP72 767 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 PNLIPRP3Q17RR3 467 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 IGSF11Q5DX21 431 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
VRK3-206ENST00000594090 ABCG5Q9H222 651 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 RDH8Q9NYR8 311 aa11.59□□□□□ -0.55
VRK3-206ENST00000594090 IGKV1D-8A0A087WSZ0 117 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 TRBV6-7A0A0A0MS04 114 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 SSX5O60225 188 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 MOSP00540 346 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 RPL39P5Q59GN2 51 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 SAMD12Q8N8I0 201 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 RBMXL1Q96E39 390 aaKnown RBP11.58□□□□□ -0.56
VRK3-206ENST00000594090 S1PR3Q99500 378 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 WNT10AQ9GZT5 417 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 DCSTAMPQ9H295 470 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 GHITMQ9H3K2 345 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 DIABLOQ9NR28 239 aa11.58□□□□□ -0.56
VRK3-206ENST00000594090 PEX14O75381 377 aa11.57□□□□□ -0.56
VRK3-206ENST00000594090 C9orf152Q5JTZ5 239 aa11.57□□□□□ -0.56
VRK3-206ENST00000594090 Q8N9W7 124 aa11.57□□□□□ -0.56
VRK3-206ENST00000594090 WIPF2Q8TF74 440 aaPredicted RBP11.57□□□□□ -0.56
VRK3-206ENST00000594090 GINS4Q9BRT9 223 aa11.57□□□□□ -0.56
VRK3-206ENST00000594090 ST6GALNAC5Q9BVH7 336 aa11.57□□□□□ -0.56
VRK3-206ENST00000594090 NCBP2LA6PVI3 153 aaKnown RBP11.56□□□□□ -0.56
VRK3-206ENST00000594090 XRCC3O43542 346 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 PRR31Q5SQ13 230 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 C11orf44Q8N8P7 122 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 S100A16Q96FQ6 103 aaKnown RBP11.56□□□□□ -0.56
VRK3-206ENST00000594090 AUNIPQ9H7T9 357 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 PLSCR3Q9NRY6 295 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 ZNF221Q9UK13 617 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 RNF150Q9ULK6 438 aa11.56□□□□□ -0.56
VRK3-206ENST00000594090 CT45A6P0DMU7 189 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 CT45A5P0DMU8 189 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 CT45A7P0DMV0 189 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 PTHLHP12272 177 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 GPR12P47775 334 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 RORCP51449 518 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 F2RL1P55085 397 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 FAM131AQ6UXB0 335 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 H1FOOQ8IZA3 346 aaPredicted RBP11.55□□□□□ -0.56
VRK3-206ENST00000594090 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 ACOT12Q8WYK0 555 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 OR2D2Q9H210 308 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
VRK3-206ENST00000594090 COMMD3Q9UBI1 195 aa11.55□□□□□ -0.56
VRK3-206ENST00000594090 OR5H14A6NHG9 310 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 PROP1O75360 226 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 FBXO24O75426 580 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 EIF4EP06730 217 aaKnown RBP11.54□□□□□ -0.56
VRK3-206ENST00000594090 OR8U9P0C7N5 309 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 GLDNQ6ZMI3 551 aaPredicted RBP11.54□□□□□ -0.56
VRK3-206ENST00000594090 CLVS1Q8IUQ0 354 aaPredicted RBP11.54□□□□□ -0.56
VRK3-206ENST00000594090 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.54□□□□□ -0.56
VRK3-206ENST00000594090 OR8U1Q8NH10 309 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 ANXA10Q9UJ72 324 aa11.54□□□□□ -0.56
VRK3-206ENST00000594090 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
VRK3-206ENST00000594090 H0YJW9 148 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 M0QZ24 198 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 APOA1P02647 267 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 CTXN2P0C2S0 81 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 CD28P10747 220 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 TAS2R20P59543 309 aa11.53□□□□□ -0.56
VRK3-206ENST00000594090 ACTBP60709 375 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms