RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 RRHO14718 337 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 CT45A6P0DMU7 189 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 CT45A5P0DMU8 189 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 CT45A7P0DMV0 189 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 LYL1P12980 280 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 OR10K2Q6IF99 312 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 NKAIN3Q8N8D7 197 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 GGHQ92820 318 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
LIG1-205ENST00000593425 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
LIG1-205ENST00000593425 ZMAT4Q9H898 229 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 ERGIC3Q9Y282 383 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 NUBP2Q9Y5Y2 271 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 TENM2Q9NT68 2774 aa12.59□□□□□ -0.39
LIG1-205ENST00000593425 OR8U9P0C7N5 309 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 PITPNAQ00169 270 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 MED21Q13503 144 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 PLGLAQ15195 96 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 C6orf201Q7Z4U5 140 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 SVOPQ8N4V2 548 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 TCTEX1D1Q8N7M0 179 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 ABHD5Q8WTS1 349 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 UQCC2Q9BRT2 126 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 FAAP24Q9BTP7 215 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 GHITMQ9H3K2 345 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 KCNK15Q9H427 330 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 PIPOXQ9P0Z9 390 aa12.58□□□□□ -0.4
LIG1-205ENST00000593425 LCE6AA0A183 80 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 OR5H14A6NHG9 310 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 H0YJW9 148 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 CELP19835 753 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 TAS2R43P59537 309 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 ST3GAL4Q11206 333 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 INSL4Q14641 139 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 CD200R1LQ6Q8B3 271 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 UNQ5815/PRO19632Q6UWF5 114 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 ABHD14BQ96IU4 210 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 CITED4Q96RK1 184 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 PALMDQ9NP74 551 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 ABRACLQ9P1F3 81 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 STEAP1Q9UHE8 339 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 LRRC42Q9Y546 428 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 BIRC6Q9NR09 4857 aa12.57□□□□□ -0.4
LIG1-205ENST00000593425 RAB29O14966 203 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 HSPB1P04792 205 aaKnown RBP12.56□□□□□ -0.4
LIG1-205ENST00000593425 TPPP2P59282 170 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 PYHIN1Q6K0P9 492 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 ZNF880Q6PDB4 577 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 C10orf67Q8IYJ2 551 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 Q8N1Y9 231 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 CYGBQ8WWM9 190 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 RHOVQ96L33 236 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 OR4C12Q96R67 309 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
LIG1-205ENST00000593425 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 SLC23A1Q9UHI7 598 aa12.56□□□□□ -0.4
LIG1-205ENST00000593425 EFCAB10A6NFE3 127 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 H7C2Y5 167 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 NAPSAO96009 420 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 CD1AP06126 327 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
LIG1-205ENST00000593425 IGHV4-30-4P0DP06 118 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 HTR2CP28335 458 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 RPS27AP62979 156 aaKnown RBP12.55□□□□□ -0.4
LIG1-205ENST00000593425 TMEM267Q0VDI3 215 aaPredicted RBP12.55□□□□□ -0.4
LIG1-205ENST00000593425 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 SETD6Q8TBK2 473 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
LIG1-205ENST00000593425 AGMATQ9BSE5 352 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 TMEM59Q9BXS4 323 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
LIG1-205ENST00000593425 WASHC3Q9Y3C0 194 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
LIG1-205ENST00000593425 LYSTQ99698 3801 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 CA2P00918 260 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 IGLV1-51P01701 117 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 UBBP0CG47 229 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 WNT4P56705 351 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 UNC119Q13432 240 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 SETD9Q8NE22 299 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 TM2D1Q9BX74 207 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
LIG1-205ENST00000593425 C19orf73Q9NVV2 129 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 OR1A1Q9P1Q5 309 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
LIG1-205ENST00000593425 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms