RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 GALMQ96C23 342 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 C5orf30Q96GV9 206 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 ARHGAP5-AS1Q96IT6 56 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 OR5B12Q96R08 314 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 CHMP1AQ9HD42 196 aaPredicted RBP13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 KCNK7Q9Y2U2 307 aa13.13□□□□□ -0.31
CROCCP3-203ENST00000589964 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 CALRP27797 417 aaKnown RBP13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 VEGFCP49767 419 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 SLC35B1P78383 322 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 RAB11BQ15907 218 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 STEAP3Q658P3 488 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 THRSPQ92748 146 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 CNBD2Q96M20 576 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 MGLLQ99685 303 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 AGMATQ9BSE5 352 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 PECRQ9BY49 303 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 ALX4Q9H161 411 aaPredicted RBP13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 TPSG1Q9NRR2 321 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 ZFP57Q9NU63 452 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 RNF150Q9ULK6 438 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 TPRKBQ9Y3C4 175 aa13.12□□□□□ -0.31
CROCCP3-203ENST00000589964 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 TXNL1O43396 289 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 IGF1P05019 195 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 GNB1P62873 340 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 HLA-DRB3P79483 266 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 Q9N2K0 584 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 PLEKHJ1Q9NW61 149 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 SLC23A1Q9UHI7 598 aa13.11□□□□□ -0.31
CROCCP3-203ENST00000589964 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 H0YJW9 148 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 NBR2O15453 112 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 ARSBP15848 533 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 DEFB121Q5J5C9 76 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 CXorf66Q5JRM2 361 aaPredicted RBP13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 LY6G6FQ5SQ64 297 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 COMMD1Q8N668 190 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 PRR25Q96S07 402 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 OR51J1Q9H342 316 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 ISYNA1Q9NPH2 558 aa13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 ELF5Q9UKW6 265 aaPredicted RBP13.1□□□□□ -0.31
CROCCP3-203ENST00000589964 NDUFA3O95167 84 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 HLA-DRB1P01911 266 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 VDAC1P21796 283 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 CDX1P47902 265 aaPredicted RBP13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 FHL3Q13643 280 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 KIR2DS1Q14954 304 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 NBEAL2Q6ZNJ1 2754 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 ZNF383Q8NA42 475 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 NPBQ8NG41 125 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 A3GALT2U3KPV4 340 aa13.09□□□□□ -0.31
CROCCP3-203ENST00000589964 IGLV1-40P01703 118 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 IGKV1-16P04430 117 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 ELANEP08246 267 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 FAM103A1Q9BTL3 118 aaKnown RBP13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 ABRACLQ9P1F3 81 aa13.08□□□□□ -0.32
CROCCP3-203ENST00000589964 IGKV1D-8A0A087WSZ0 117 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 TRAV41A0A0B4J266 112 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 I3L521 148 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 CEACAM6P40199 344 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 CX3CL1P78423 397 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 TBCEQ15813 527 aaPredicted RBP13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 IGSF11Q5DX21 431 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 CLCC1Q96S66 551 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 C12orf4Q9NQ89 552 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 ZNF230Q9UIE0 474 aaPredicted RBP13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
CROCCP3-203ENST00000589964 RRHO14718 337 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 RRP9O43818 475 aaKnown RBP13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 RGS11O94810 467 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 DUS4LO95620 317 aaKnown RBP13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 LIN54Q6MZP7 749 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 MOB1BQ7L9L4 216 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 OR5AN1Q8NGI8 311 aa13.06□□□□□ -0.32
CROCCP3-203ENST00000589964 OR8U1Q8NH10 309 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms