RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 IGHV1-8P0DP01 117 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 CD300CQ08708 224 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 ANKRD55Q3KP44 614 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 CT45A1Q5HYN5 189 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 CT45A3Q8NHU0 189 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 COQ8AQ8NI60 647 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 ABHD14BQ96IU4 210 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 GPHA2Q96T91 129 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 MGAT4CQ9UBM8 478 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 SHPKQ9UHJ6 478 aa14.31□□□□□ -0.12
CXXC1-212ENST00000589940 MAP1AP78559 2803 aaPredicted RBP14.31□□□□□ -0.12
CXXC1-212ENST00000589940 YLPM1P49750 1951 aaKnown RBP14.31□□□□□ -0.12
CXXC1-212ENST00000589940 IGHV4-30-2A0A087WSY4 118 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 C3orf85A0A1B0GTC6 90 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 A8MV72 311 aaPredicted RBP14.3□□□□□ -0.12
CXXC1-212ENST00000589940 KIAA1324LA8MWY0 1029 aaPredicted RBP14.3□□□□□ -0.12
CXXC1-212ENST00000589940 SLC31A2O15432 143 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 OR5AC1P0C628 307 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 DNASE1P24855 282 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 CD83Q01151 205 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 Q3ZCU0 254 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 LIN54Q6MZP7 749 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 ST6GAL2Q96JF0 529 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 SUCNR1Q9BXA5 334 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 IFI27L2Q9H2X8 130 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 A8MXK9 166 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 ZFP36P26651 326 aaKnown RBP14.3□□□□□ -0.12
CXXC1-212ENST00000589940 GPR12P47775 334 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 C5orf30Q96GV9 206 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 PRR13Q9NZ81 148 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 SESN1Q9Y6P5 492 aa14.3□□□□□ -0.12
CXXC1-212ENST00000589940 A0A087X0M5 115 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 A0A1B0GX30 115 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 hCG_1809904A0A1W2PP81 198 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 A0A1W2PPE2 198 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 A0A1W2PR64 198 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 A0A1W2PRV1 198 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 DBX1A6NMT0 343 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 F2RP25116 425 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 GNG10P50151 68 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 TMEM187Q14656 261 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 C2orf68Q2NKX9 166 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 SP6Q3SY56 376 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 SLC25A48Q6ZT89 311 aaKnown RBP14.29□□□□□ -0.12
CXXC1-212ENST00000589940 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 RANGRFQ9HD47 186 aaPredicted RBP14.29□□□□□ -0.12
CXXC1-212ENST00000589940 SDHAF2Q9NX18 166 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 IGHV4-61A0A0C4DH41 118 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 A0A1W2PPE3 182 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 DEFB113Q30KQ7 82 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 GLYATL2Q8WU03 294 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 PPP1R14BQ96C90 147 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 DMRTB1Q96MA1 342 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 ONECUT1Q9UBC0 465 aa14.29□□□□□ -0.12
CXXC1-212ENST00000589940 H0Y980 276 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 GOSR2O14653 212 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 EIF4EBP1Q13541 118 aaPredicted RBP14.28□□□□□ -0.12
CXXC1-212ENST00000589940 CLEC12BQ2HXU8 276 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 LRRC75A-AS1Q8N1F1 130 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 C8orf31Q8N9H6 132 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 OR51H1Q8NH63 302 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 ZNF436Q9C0F3 470 aaPredicted RBP14.28□□□□□ -0.12
CXXC1-212ENST00000589940 TMEM222Q9H0R3 208 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 TMEM133Q9H2Q1 129 aa14.28□□□□□ -0.12
CXXC1-212ENST00000589940 RNF212BA8MTL3 300 aa14.27□□□□□ -0.12
CXXC1-212ENST00000589940 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.12
CXXC1-212ENST00000589940 B3GALNT1O75752 331 aa14.27□□□□□ -0.12
CXXC1-212ENST00000589940 LCN2P80188 198 aa14.27□□□□□ -0.12
CXXC1-212ENST00000589940 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.12
CXXC1-212ENST00000589940 MSI2Q96DH6 328 aaKnown RBP14.27□□□□□ -0.12
CXXC1-212ENST00000589940 FYTTD1Q96QD9 318 aaKnown RBP14.27□□□□□ -0.12
CXXC1-212ENST00000589940 GAB2Q9UQC2 676 aa14.27□□□□□ -0.12
CXXC1-212ENST00000589940 M0R1W7 72 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 RAB29O14966 203 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 HLA-GP17693 338 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 BTNL3Q6UXE8 466 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 LRTM2Q8N967 370 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.27□□□□□ -0.13
CXXC1-212ENST00000589940 OR5M8Q8NGP6 311 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.13
CXXC1-212ENST00000589940 PIPOXQ9P0Z9 390 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 UNC79Q9P2D8 2635 aa14.27□□□□□ -0.13
CXXC1-212ENST00000589940 FOXH1O75593 365 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 SLC25A16P16260 332 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 H2BFSP57053 126 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 SRPXP78539 464 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 PAX2Q02962 417 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 ZNF66Q6ZN08 573 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 LYG1Q8N1E2 194 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 ZNF596Q8TC21 504 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 MBD6Q96DN6 1003 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 HSD17B10Q99714 261 aaKnown RBP14.26□□□□□ -0.13
CXXC1-212ENST00000589940 RAB18Q9NP72 206 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 SAA2-SAA4A0A096LPE2 208 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 PROP1O75360 226 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 SIX6O95475 246 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 SAA2P0DJI9 122 aaPredicted RBP14.26□□□□□ -0.13
CXXC1-212ENST00000589940 UCP1P25874 307 aa14.26□□□□□ -0.13
CXXC1-212ENST00000589940 ARF6P62330 175 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms