RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PKDREJQ9NTG1 2253 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 RTTNQ86VV8 2226 aa8.34□□□□□ -1.07
VPS25-202ENST00000589219 TRAV39A0A0B4J263 110 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 IGSF23A1L1A6 192 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 SPINT2O43291 252 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 DFFBO76075 338 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 CLDN14O95500 239 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 IGLV2-14P01704 120 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 HBZP02008 142 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 APOC3P02656 99 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 ADH4P08319 380 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 DANCRP0C864 163 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 LPAR6P43657 344 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 GATA4P43694 442 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 CEBPDP49716 269 aaPredicted RBP8.33□□□□□ -1.08
VPS25-202ENST00000589219 AKR1C2P52895 323 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 RPL23AP62750 156 aaKnown RBP8.33□□□□□ -1.08
VPS25-202ENST00000589219 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 STX12Q86Y82 276 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 SVBPQ8N300 66 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 DRAM1Q8N682 238 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 NUP37Q8NFH4 326 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 OR1L1Q8NH94 360 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 LYPD6BQ8NI32 183 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 VKORC1Q9BQB6 163 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 NCOR1P1Q9H4R4 102 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 WFDC1Q9HC57 220 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 UFSP2Q9NUQ7 469 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 COA4Q9NYJ1 87 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 COQ3Q9NZJ6 369 aa8.33□□□□□ -1.08
VPS25-202ENST00000589219 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 IGHV3-64DA0A0J9YX35 117 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 A8MXE2 369 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 C3orf80F5H4A9 247 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 MGST3O14880 152 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 ZNF737O75373 536 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 FBXO24O75426 580 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 OR8U9P0C7N5 309 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 EPHA1P21709 976 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 TNFSF4P23510 183 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 PRDX2P32119 198 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 CAMLGP49069 296 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 TAS2R30P59541 319 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 HTD2P86397 168 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 CXorf66Q5JRM2 361 aaPredicted RBP8.32□□□□□ -1.08
VPS25-202ENST00000589219 C10orf91Q5T1B1 145 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 DOLPP1Q86YN1 238 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 OR8U1Q8NH10 309 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 MRGPRDQ8TDS7 321 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 CA5BP1Q8WTZ4 195 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 TMEM171Q8WVE6 324 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
VPS25-202ENST00000589219 LRRC46Q96FV0 321 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 BSCL2Q96G97 398 aaPredicted RBP8.32□□□□□ -1.08
VPS25-202ENST00000589219 SNX22Q96L94 193 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
VPS25-202ENST00000589219 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 OR2D2Q9H210 308 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 HRH4Q9H3N8 390 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 TREM1Q9NP99 234 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 JPT1Q9UK76 154 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 PPP1R3CQ9UQK1 317 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 LAMP3Q9UQV4 416 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 RNF115Q9Y4L5 304 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 MMP24Q9Y5R2 645 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 WSB1Q9Y6I7 421 aa8.32□□□□□ -1.08
VPS25-202ENST00000589219 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 ATP6V1G2-DDX39BF2Z307 99 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 ABCD4O14678 606 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 IGKV1-39P01597 117 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 IGKV1D-39P04432 117 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 EGR1P18146 543 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 CCKARP32238 428 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 SULT1A1P50225 295 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 DEFA5Q01523 94 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 NHLH2Q02577 135 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 AESQ08117 197 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 EIF4EBP1Q13541 118 aaPredicted RBP8.31□□□□□ -1.08
VPS25-202ENST00000589219 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 TMEM30BQ3MIR4 351 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 GCSAMQ8N6F7 178 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 CD177Q8N6Q3 437 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 OR13A1Q8NGR1 328 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 OR2V2Q96R30 315 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 GPHA2Q96T91 129 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 HSD17B10Q99714 261 aaKnown RBP8.31□□□□□ -1.08
VPS25-202ENST00000589219 ATP5SQ99766 215 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
VPS25-202ENST00000589219 NKX6-2Q9C056 277 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms