RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CT45A7P0DMV0 189 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 IGHV4-30-4P0DP06 118 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 OR2AK2Q8NG84 335 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 SULT4A1Q9BR01 284 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 PARP12Q9H0J9 701 aaKnown RBP14.14□□□□□ -0.15
CCDC43-204ENST00000588687 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 KIAA1456Q9P272 454 aa14.14□□□□□ -0.15
CCDC43-204ENST00000588687 EXOSC1Q9Y3B2 195 aaKnown RBP14.14□□□□□ -0.15
CCDC43-204ENST00000588687 H0YJW9 148 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 ST8SIA5O15466 376 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 IGLV1-51P01701 117 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCDC43-204ENST00000588687 RPL39P5Q59GN2 51 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 ZFAND6Q6FIF0 208 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 SVOPQ8N4V2 548 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 FAM46BQ96A09 425 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 PALMDQ9NP74 551 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 A3GALT2U3KPV4 340 aa14.13□□□□□ -0.15
CCDC43-204ENST00000588687 OR5H14A6NHG9 310 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 HSPA12AO43301 675 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 RGS11O94810 467 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 BAG2O95816 211 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 IGHV3-11P01762 117 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 MYL12AP19105 171 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 PITPNAQ00169 270 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 PYHIN1Q6K0P9 492 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 NKAIN3Q8N8D7 197 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 GALMQ96C23 342 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 RHOVQ96L33 236 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 UQCC2Q9BRT2 126 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 AGMATQ9BSE5 352 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 FAM103A1Q9BTL3 118 aaKnown RBP14.12□□□□□ -0.15
CCDC43-204ENST00000588687 GHITMQ9H3K2 345 aa14.12□□□□□ -0.15
CCDC43-204ENST00000588687 IRGMA1A4Y4 181 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 LDLRAD4O15165 306 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 NAPSAO96009 420 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 HSPB1P04792 205 aaKnown RBP14.11□□□□□ -0.15
CCDC43-204ENST00000588687 CAPGP40121 348 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 VEGFCP49767 419 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 AKIRIN2Q53H80 203 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 GLDNQ6ZMI3 551 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-204ENST00000588687 PQLC1Q8N2U9 271 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 OR5AN1Q8NGI8 311 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 SLC23A1Q9UHI7 598 aa14.11□□□□□ -0.15
CCDC43-204ENST00000588687 TNCP24821 2201 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 DYNC1I1O14576 645 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 SSBP2P81877 361 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-204ENST00000588687 ACTBL2Q562R1 376 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 ISOC1Q96CN7 298 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 TMEM80Q96HE8 168 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 SMPD3Q9NY59 655 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-204ENST00000588687 CNOT2Q9NZN8 540 aaKnown RBP14.1□□□□□ -0.15
CCDC43-204ENST00000588687 PIPOXQ9P0Z9 390 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 ERGIC3Q9Y282 383 aa14.1□□□□□ -0.15
CCDC43-204ENST00000588687 PNMA8CA0A1B0GUJ8 204 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 RAB29O14966 203 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 PROP1O75360 226 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 TPPP2P59282 170 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 ADAMTSL5Q6ZMM2 481 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 C6orf201Q7Z4U5 140 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 PPP1R27Q86WC6 154 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 LFNGQ8NES3 379 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
CCDC43-204ENST00000588687 MS4A10Q96PG2 267 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 OR4C12Q96R67 309 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 THAP7Q9BT49 309 aaPredicted RBP14.09□□□□□ -0.15
CCDC43-204ENST00000588687 FAAP24Q9BTP7 215 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 SLA2Q9H6Q3 261 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 S100A14Q9HCY8 104 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 GHRLQ9UBU3 117 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 STUB1Q9UNE7 303 aa14.09□□□□□ -0.15
CCDC43-204ENST00000588687 ITGB1BP1O14713 200 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 RBBP9O75884 186 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 CA2P00918 260 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 CD1AP06126 327 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 TAS2R43P59537 309 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 RPS27AP62979 156 aaKnown RBP14.08□□□□□ -0.16
CCDC43-204ENST00000588687 UNC119Q13432 240 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 OR10K2Q6IF99 312 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 UNQ5815/PRO19632Q6UWF5 114 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 ZNF562Q6V9R5 426 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 IL34Q6ZMJ4 242 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 IL1F10Q8WWZ1 152 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 ABHD14BQ96IU4 210 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 NICN1Q9BSH3 213 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 KCNK15Q9H427 330 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 STEAP1Q9UHE8 339 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 WASHC3Q9Y3C0 194 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 LRRC42Q9Y546 428 aa14.08□□□□□ -0.16
CCDC43-204ENST00000588687 A0A0A6YYD4 124 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 ARPC1BO15143 372 aaKnown RBP14.07□□□□□ -0.16
CCDC43-204ENST00000588687 IGKV1-16P04430 117 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 TFAP2AP05549 437 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 HTR2CP28335 458 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
CCDC43-204ENST00000588687 INSL4Q14641 139 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 PLGLAQ15195 96 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 PSG5Q15238 335 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 LAIR2Q6ISS4 152 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms