RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 CLEC9AQ6UXN8 241 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
CCDC130-208ENST00000588071 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 OR2D2Q9H210 308 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 GHITMQ9H3K2 345 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 SLC2A8Q9NY64 477 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
CCDC130-208ENST00000588071 LEUTXA8MZ59 168 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 RAB29O14966 203 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 NPFFO15130 113 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 SLC22A5O76082 557 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 IGLV1-47P01700 117 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 UCP3P55916 312 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 FAM120AOSQ5T036 256 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 AADACL3Q5VUY0 350 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 OR4P4Q8NGL7 312 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 S1PR3Q99500 378 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 AGMATQ9BSE5 352 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 DPAGT1Q9H3H5 408 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 CCL28Q9NRJ3 127 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
CCDC130-208ENST00000588071 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ODF3BA8MYP8 253 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 HNF1AP20823 631 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 EPHA1P21709 976 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 CEACAM3P40198 252 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 BPIFB3P59826 476 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ABCA11PQ4W5N1 156 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 MIDNQ504T8 468 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 RUSC1-AS1Q66K80 236 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 BRD3OSQ6XYD6 125 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ODF3L1Q8IXM7 274 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 SLC38A6Q8IZM9 456 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ZNF645Q8N7E2 425 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 OR13C8Q8NGS7 320 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ENKURQ8TC29 256 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 ZFAND1Q8TCF1 268 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 MARCH1Q8TCQ1 289 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 RPEQ96AT9 228 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 AKR1E2Q96JD6 320 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
CCDC130-208ENST00000588071 MS4A7Q9GZW8 240 aaPredicted RBP11.47□□□□□ -0.57
CCDC130-208ENST00000588071 FXYD6Q9H0Q3 95 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
CCDC130-208ENST00000588071 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
CCDC130-208ENST00000588071 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 GPR31O00270 319 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 S100GP29377 79 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 GNRHRP30968 328 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 BTCP35070 178 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 SAA4P35542 130 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 SRP14P37108 136 aaKnown RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 BAMBIQ13145 260 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 RBMS2Q15434 407 aaKnown RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 RPL39P5Q59GN2 51 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 LHFPL4Q7Z7J7 247 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 CMTM1Q8IZ96 169 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 ZBTB34Q8NCN2 500 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 RSRP1Q9BUV0 290 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 SDHAF2Q9NX18 166 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 C14orf166Q9Y224 244 aaKnown RBP11.46□□□□□ -0.57
CCDC130-208ENST00000588071 FAM96BQ9Y3D0 163 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
CCDC130-208ENST00000588071 ZNF469Q96JG9 3925 aaPredicted RBP11.45□□□□□ -0.58
CCDC130-208ENST00000588071 CSPG4Q6UVK1 2322 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
CCDC130-208ENST00000588071 RLN1P04808 185 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 SLC6A1P30531 599 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 SURF2Q15527 256 aaPredicted RBP11.45□□□□□ -0.58
CCDC130-208ENST00000588071 SSX2Q16385 188 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 PHLDA2Q53GA4 152 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 PLA1AQ53H76 456 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.45□□□□□ -0.58
CCDC130-208ENST00000588071 MALSU1Q96EH3 234 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 GSX1Q9H4S2 264 aaPredicted RBP11.45□□□□□ -0.58
CCDC130-208ENST00000588071 TMEM160Q9NX00 188 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 COPZ2Q9P299 210 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 GPR132Q9UNW8 380 aa11.45□□□□□ -0.58
CCDC130-208ENST00000588071 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
CCDC130-208ENST00000588071 M0R1X1 148 aa11.44□□□□□ -0.58
CCDC130-208ENST00000588071 TNFSF12O43508 249 aa11.44□□□□□ -0.58
CCDC130-208ENST00000588071 NDUFB6O95139 128 aa11.44□□□□□ -0.58
CCDC130-208ENST00000588071 IGLV2-14P01704 120 aa11.44□□□□□ -0.58
CCDC130-208ENST00000588071 TCRBP04435 133 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms