RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 A6NNC1 897 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 RP2O75695 350 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 OR2F2O95006 317 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 FSTL3O95633 263 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 OR2F1Q13607 317 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 ZNF345Q14585 488 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 FOXRED2Q8IWF2 684 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 NEU4Q8WWR8 484 aaPredicted RBP16.4■□□□□ 0.22
TRIM47-204ENST00000587339 H1FXQ92522 213 aaKnown RBP16.4■□□□□ 0.22
TRIM47-204ENST00000587339 C19orf12Q9NSK7 152 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 GFOD1Q9NXC2 390 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 TAS2R3Q9NYW6 316 aa16.4■□□□□ 0.22
TRIM47-204ENST00000587339 A0A0D9SG52 128 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 SCGB1D2O95969 90 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 IGHV3-7P01780 117 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 ACOT7LQ6ZUV0 252 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 OR52M1Q8NGK5 317 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 C5orf30Q96GV9 206 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 GAL3ST2Q9H3Q3 398 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 UBTD1Q9HAC8 227 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 SDHAF2Q9NX18 166 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 IDI2-AS1Q9NZ38 188 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 OR5AC2Q9NZP5 309 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 RNF222A6NCQ9 220 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 LY6HO94772 140 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 LYL1P12980 280 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 NFYBP25208 207 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 CATR1Q13166 79 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF273Q14593 569 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 TEX261Q6UWH6 196 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 BTNL3Q6UXE8 466 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 SPIN2AQ99865 258 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 SPIN2BQ9BPZ2 258 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 ITGB1BP2Q9UKP3 347 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 U3KQ87 197 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 DSCAML1Q8TD84 2053 aa16.39■□□□□ 0.21
TRIM47-204ENST00000587339 RLN2P04090 185 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 GPR12P47775 334 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF134P52741 427 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 MRPS11P82912 194 aaKnown RBP16.38■□□□□ 0.21
TRIM47-204ENST00000587339 EIF4EBP1Q13541 118 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-204ENST00000587339 SMCO1Q147U7 214 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 TMEM30BQ3MIR4 351 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 Q3ZCU0 254 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 ESCO2Q56NI9 601 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 NMSQ5H8A3 153 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 LPAR3Q9UBY5 353 aa16.38■□□□□ 0.21
TRIM47-204ENST00000587339 EPG5Q9HCE0 2579 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 KCNAB3O43448 404 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 IGHV2-70P01814 119 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 MBPP02686 304 aaPredicted RBP16.37■□□□□ 0.21
TRIM47-204ENST00000587339 RAB7AP51149 207 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF585BQ52M93 769 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 TMEM200BQ69YZ2 307 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF767PQ75MW2 155 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 KCNRGQ8N5I3 272 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 OR1S1Q8NH92 325 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 LEAP2Q969E1 77 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF714Q96N38 554 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 HSD17B10Q99714 261 aaKnown RBP16.37■□□□□ 0.21
TRIM47-204ENST00000587339 LSM5Q9Y4Y9 91 aaKnown RBP16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ITGB1BP1O14713 200 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 CLDN1O95832 211 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 DAOP14920 347 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 RPL30P62888 115 aaKnown RBP16.37■□□□□ 0.21
TRIM47-204ENST00000587339 THOC7Q6I9Y2 204 aaKnown RBP16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF66Q6ZN08 573 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ABHD14AQ9BUJ0 271 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 IFI27L2Q9H2X8 130 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 ZFP57Q9NU63 452 aa16.37■□□□□ 0.21
TRIM47-204ENST00000587339 DEDDO75618 318 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 MMP23AO75900 390 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 NUP62P37198 522 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-204ENST00000587339 UTF1Q5T230 341 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 AVPI1Q5T686 147 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 PRAMEF5Q5TYX0 476 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 ZNF680Q8NEM1 530 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 OR4D5Q8NGN0 318 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 RNASE11Q8TAA1 199 aaKnown RBP16.36■□□□□ 0.21
TRIM47-204ENST00000587339 TCTEX1D2Q8WW35 142 aa16.36■□□□□ 0.21
TRIM47-204ENST00000587339 RPUSD1Q9UJJ7 312 aaKnown RBP16.36■□□□□ 0.21
TRIM47-204ENST00000587339 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
TRIM47-204ENST00000587339 CLEC18AA5D8T8 446 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 C1QL1O75973 258 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 IGKV1-39P01597 117 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 IGKV1D-39P04432 117 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 CCL3L1P16619 93 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 CLEC18CQ8NCF0 446 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 OR10A7Q8NGE5 316 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 RRNAD1Q96FB5 475 aaKnown RBP16.35■□□□□ 0.21
TRIM47-204ENST00000587339 TIMD4Q96H15 378 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 KANTRA0A1W2PQU2 76 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 K7EPK0 472 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 SLC31A2O15432 143 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 ST8SIA3O43173 380 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 AKR1C2P52895 323 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 CT45A1Q5HYN5 189 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 OR2B11Q5JQS5 317 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 HEPN1Q6WQI6 88 aa16.35■□□□□ 0.21
TRIM47-204ENST00000587339 SPAG16Q8N0X2 631 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms