RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 NR2C2APQ86WQ0 139 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 CCDC54Q8NEL0 328 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 OR51A4Q8NGJ6 313 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 ADAT3Q96EY9 351 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-220ENST00000585031 CMTM3Q96MX0 182 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 S1PR3Q99500 378 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 LINC00574Q9H8X3 128 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 PLEKHA1Q9HB21 404 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 KIAA1456Q9P272 454 aa13.96□□□□□ -0.17
TOP3A-220ENST00000585031 IFITM5A6NNB3 132 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 A8MZ25 164 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 HSD17B6O14756 317 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF44P15621 663 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 PPIFP30405 207 aaKnown RBP13.95□□□□□ -0.18
TOP3A-220ENST00000585031 ATP1B3P54709 279 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 MTCP1P56278 107 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 DEFA1P59665 94 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 DEFA3P59666 94 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF816Q0VGE8 651 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-220ENST00000585031 CNIH2Q6PI25 160 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 LRRTM1Q86UE6 522 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 IZUMO1Q8IYV9 350 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 GDPD1Q8N9F7 314 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 TMEM104Q8NE00 496 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 UBE2E2Q96LR5 201 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 RABL2AQ9UBK7 228 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-220ENST00000585031 KIF25Q9UIL4 384 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 RABL2BQ9UNT1 228 aa13.95□□□□□ -0.18
TOP3A-220ENST00000585031 TRAV39A0A0B4J263 110 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 G3V318 75 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 KDM4BO94953 1096 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 IGF1P05019 195 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 SLC2A2P11168 524 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF20P17024 532 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 ATF1P18846 271 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 VDAC1P21796 283 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 GLP1RP43220 463 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 SCAND1P57086 179 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 GLT8D1Q68CQ7 371 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 SAMD12Q8N8I0 201 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 DNAAF1Q8NEP3 725 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 SPACA5Q96QH8 159 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 OR6C3Q9NZP0 311 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 SPATA2Q9UM82 520 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 WSB1Q9Y6I7 421 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 V9GYH0 126 aa13.94□□□□□ -0.18
TOP3A-220ENST00000585031 TRAV8-7A0A075B6U6 113 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 APOA1P02647 267 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 MAS1P04201 325 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 HAGHQ16775 308 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 PYDC2Q56P42 97 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 ACSM6Q6P461 480 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 NKAIN3Q8N8D7 197 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 OR51T1Q8NGJ9 327 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 OR2T10Q8NGZ9 312 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 ORAI1Q96D31 301 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 TPSG1Q9NRR2 321 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 VSIG4Q9Y279 399 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 ETV7Q9Y603 341 aa13.93□□□□□ -0.18
TOP3A-220ENST00000585031 HSPB6O14558 160 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 IGLV1-40P01703 118 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 SNRPBP14678 240 aaKnown RBP13.92□□□□□ -0.18
TOP3A-220ENST00000585031 SSTR5P35346 364 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 IL18Q14116 193 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 UBE2NLQ5JXB2 153 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 HES5Q5TA89 166 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 SERPINA12Q8IW75 414 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 OR5D18Q8NGL1 313 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 OR10X1Q8NGY0 326 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 PLPPR1Q8TBJ4 325 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 RASL11BQ9BPW5 248 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 SRRQ9GZT4 340 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 TAS2R4Q9NYW5 299 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 EXTL2Q9UBQ6 330 aa13.92□□□□□ -0.18
TOP3A-220ENST00000585031 MEIKINA0A087WXM9 373 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 DEGS1O15121 323 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 CYB5AP00167 134 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 GAPDHP04406 335 aaKnown RBP13.91□□□□□ -0.18
TOP3A-220ENST00000585031 IGFBP3P17936 291 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-220ENST00000585031 ELK1P19419 428 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 RAB11BQ15907 218 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 TRIM16LQ309B1 348 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 LYSMD2Q8IV50 215 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 OR5D14Q8NGL3 314 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 IL17DQ8TAD2 202 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 LGALS14Q8TCE9 139 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 ST6GALNAC6Q969X2 333 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 FGGYQ96C11 551 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 GFI1Q99684 422 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 SPATA25Q9BR10 227 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 RETNQ9HD89 108 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 STEAP1Q9UHE8 339 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF580Q9UK33 172 aa13.91□□□□□ -0.18
TOP3A-220ENST00000585031 TRAV24A0A0B4J272 114 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 SLC17A2O00624 439 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms