RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SRSF6Q13247 344 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PSG3Q16557 428 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ABCA11PQ4W5N1 156 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 C10orf91Q5T1B1 145 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 CCDC144NLQ6NUI1 221 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 FAM213BQ8TBF2 198 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 C1orf123Q9NWV4 160 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 CACFD1Q9UGQ2 172 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 AQP7O14520 342 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 GGCTO75223 188 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TBPP20226 339 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SRYQ05066 204 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TCF15Q12870 199 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 HIST3H3Q16695 136 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ZNF774Q6NX45 483 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TMEM217Q8N7C4 229 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 FGFBP3Q8TAT2 258 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 NABP1Q96AH0 204 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 UFC1Q9Y3C8 167 aa9.92□□□□□ -0.82
CDK5RAP3-231ENST00000584063 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 M0R135 149 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TSPAN13O95857 204 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 IGHV2-5P01817 119 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SULT1A2P50226 295 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 CCL20P78556 96 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 IL15RAQ13261 267 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SKA3Q8IX90 412 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ZIC4Q8N9L1 334 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PRSS33Q8NF86 280 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 RTN4IP1Q8WWV3 396 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ZNF799Q96GE5 643 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ULBP2Q9BZM5 246 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PITPNC1Q9UKF7 332 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 POLR3KQ9Y2Y1 108 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 YLPM1P49750 1951 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PHF1O43189 567 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 DEDDO75618 318 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TAS2R46P59540 309 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SRSF7Q16629 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ZNF766Q5HY98 468 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 GCSAMLQ5JQS6 135 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 LDLRAD2Q5SZI1 272 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 TMEM268Q5VZI3 342 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ZFP62Q8NB50 900 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SMCO4Q9NRQ5 59 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 NECAP2Q9NVZ3 263 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 OR14J1Q9UGF5 321 aa9.91□□□□□ -0.82
CDK5RAP3-231ENST00000584063 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PPIAL4EA0A075B759 164 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 IGLV3-32A0A0A0MS00 114 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 A0A1B0GUS0 222 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 FAM24AA6NFZ4 105 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SEC14L6B5MCN3 397 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 UMAD1C9J7I0 102 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PPIAL4DF5H284 164 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 PPIAL4FP0DN26 164 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 GDF1P27539 372 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 DUSP1P28562 367 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 SLC10A1Q14973 349 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 IGFBP7Q16270 282 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 LRRC75A-AS1Q8N1F1 130 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 HPSE2Q8WWQ2 592 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 RSG1Q9BU20 258 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 MEMO1Q9Y316 297 aa9.9□□□□□ -0.82
CDK5RAP3-231ENST00000584063 FAM166BA8MTA8 275 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NPIPA3F8WFD2 350 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SERPINA7P05543 415 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 LIFP15018 202 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DVL1P1P54792 670 aaPredicted RBP9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DNLZQ5SXM8 178 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FBXW12Q6X9E4 464 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FBXL14Q8N1E6 418 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR2M7Q8NG81 312 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SSC4DQ8WTU2 575 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DEPPQ9NTK1 212 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ANXA10Q9UJ72 324 aa9.9□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NBASA2RRP1 2371 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OOEPA6NGQ2 149 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FAM157AC9JC47 383 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DHRS3O75911 302 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SCGNO76038 276 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CST7O76096 145 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 YIF1AO95070 293 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF728P0DKX0 622 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 H3F3AP84243 136 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF343Q6P1L6 599 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PSMF1Q92530 271 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SIGLEC12Q96PQ1 595 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NCKAP5O14513 1909 aa9.89□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TGIF2-C20orf24A0A0A6YYL0 155 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms