RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 TUBA4BQ9H853 241 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 POPDC3Q9HBV1 291 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 ACP6Q9NPH0 428 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC17A5Q9NRA2 495 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 FBXO6Q9NRD1 293 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 SMCO4Q9NRQ5 59 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 GNG12Q9UBI6 72 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 DUX4Q9UBX2 424 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 NAT8BQ9UHF3 227 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 TRAPPC4Q9Y296 219 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 CARHSP1Q9Y2V2 147 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 PLA2R1Q13018 1463 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 MAGI2Q86UL8 1455 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 CACNA1SQ13698 1873 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC7Q96NW7 1537 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 CASZ1Q86V15 1759 aa2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 INO80Q9ULG1 1556 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-202ENST00000577300 TNS3Q68CZ2 1445 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A0G2JLM5 398 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM189A5PLL7 270 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF705EA8MWA4 302 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 HSD17B6O14756 317 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 HMGB3O15347 200 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ALOX12BO75342 701 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 GCM2O75603 506 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR7C1O76099 320 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 NRASP01111 189 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 GCGP01275 180 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL7P18124 248 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 GGT1P19440 569 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 MYL9P24844 172 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 HTR1DP28221 377 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL12P30050 165 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 KIR2DS2P43631 304 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 P2RY1P47900 373 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 REG1BP48304 166 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 EFNB2P52799 333 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 HCCSP53701 268 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 APOC4P55056 127 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 DLX6P56179 175 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 NDUFA6P56556 154 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TAS2R31P59538 309 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 S100A10P60903 97 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RND3P61587 244 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RPS28P62857 69 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 HOXC5Q00444 222 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM53BQ14153 422 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 EDDM3AQ14507 147 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RHEBQ15382 184 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR8B8Q15620 311 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC26Q2I0M4 334 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TDRG1Q3Y452 100 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ACSF3Q4G176 576 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 KHDC3LQ587J8 217 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 KPRPQ5T749 579 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM244Q5VVB8 128 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 SFXN4Q6P4A7 337 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 LEG1Q6P5S2 330 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TOMM20LQ6UXN7 152 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 STAC2Q6ZMT1 411 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 FA2HQ7L5A8 372 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM19A5Q7Z5A7 132 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 PLPP5Q8NEB5 264 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR1S1Q8NH92 325 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR13C6PQ8NH95 151 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF418Q8TF45 676 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 EEF1AKMT1Q8WVE0 214 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ARL11Q969Q4 196 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC58Q96CX6 371 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 IMP4Q96G21 291 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TRIB3Q96RU7 358 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 EBPLQ9BY08 206 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 SELENOIQ9C0D9 397 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM126AQ9H061 195 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR51I1Q9H343 314 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 NMRAL1Q9HBL8 299 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 MRPL16Q9NX20 251 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 MED29Q9NX70 200 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 SIGLEC8Q9NYZ4 499 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 IDI2-AS1Q9NZ38 188 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC23A2Q9UGH3 650 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 PRO0628Q9UI54 55 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 OR51B2Q9Y5P1 312 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 UBIAD1Q9Y5Z9 338 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 MAPKBP1O60336 1514 aa2.35□□□□□ -2.03
SMCHD1-202ENST00000577300 AKAP11Q9UKA4 1901 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 NSD3Q9BZ95 1437 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ABCC3O15438 1527 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 WDR62O43379 1518 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TRAV38-1A0A0B4J264 116 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 GLYATL1P3A0A0U1RQE8 302 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A1W2PP18 115 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5B21A6NL26 309 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 IFITM5A6NNB3 132 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 IDSB3KWA1 339 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms