RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ARPC5LQ9BPX5 153 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 AGMATQ9BSE5 352 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR2D2Q9H210 308 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 CALYQ9NYX4 217 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4Q9UBX2 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 KLF2Q9Y5W3 355 aaPredicted RBP23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 K7EPK0 472 aa23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 SLC25A6P12236 298 aa23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 CLLU1Q5K131 121 aa23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 FAM53AQ6NSI3 398 aaPredicted RBP23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 FAM71E2Q8N5Q1 922 aa23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 FAM216BQ8N7L0 139 aa23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 FAM212BQ9NTI7 297 aaPredicted RBP23.57■■□□□ 1.36
CTDNEP1-210ENST00000574322 ITGB1BP1O14713 200 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 C17orf58Q2M2W7 97 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 MORN2Q502X0 79 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 OR8H3Q8N146 312 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 GSX2Q9BZM3 304 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 KBTBD11-OT1A0A1B0GTJ5 212 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 RPS10-NUDT3A0A1W2PQS6 291 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 TCTEX1D1Q8N7M0 179 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 SCARB1Q8WTV0 552 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 CCL17Q92583 94 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 LSM10Q969L4 123 aaKnown RBP23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 C5orf30Q96GV9 206 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 CLN8Q9UBY8 286 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 POMT1Q9Y6A1 747 aa23.56■■□□□ 1.36
CTDNEP1-210ENST00000574322 TRGV10A0A0A0MS01 117 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 MSGN1A6NI15 193 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 E5RGE8 158 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 C19orf84I3L1E1 186 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 ST8SIA3O43173 380 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 KCNAB3O43448 404 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 TMEM30BQ3MIR4 351 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 ZNF585BQ52M93 769 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 ST8SIA2Q92186 375 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 PLEKHA2Q9HB19 425 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 RNF150Q9ULK6 438 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 NSG2Q9Y328 171 aa23.55■■□□□ 1.36
CTDNEP1-210ENST00000574322 FASNP49327 2511 aaKnown RBP23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 IGHV3-43A0A0B4J1X8 118 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 IGHV1-69-2A0A0G2JMI3 117 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 A1L4Q6 167 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 FSTL3O95633 263 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 IGHV3-43DP0DP04 118 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 HKR1P10072 659 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 PPOXP50336 477 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 TCF23Q7RTU1 214 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 FAM219AQ8IW50 185 aa23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 LSM5Q9Y4Y9 91 aaKnown RBP23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 GCN1Q92616 2671 aaKnown RBP23.54■■□□□ 1.36
CTDNEP1-210ENST00000574322 ADAM20O43506 726 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 IGKV1-39P01597 117 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 IGKV1D-39P04432 117 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 ZNF66Q6ZN08 573 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 GNG12Q9UBI6 72 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 KAAG1Q9UBP8 84 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 PKDREJQ9NTG1 2253 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 ZNF729A6NN14 1252 aaPredicted RBP23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 TMPRSS2O15393 492 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 FOXRED2Q8IWF2 684 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 STOML3Q8TAV4 291 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 PHYHIPLQ96FC7 376 aa23.53■■□□□ 1.36
CTDNEP1-210ENST00000574322 A0A1B0GU03 582 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 LINC00862A6NCI5 91 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 CLDN1O95832 211 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 SCGB1D2O95969 90 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 MEF2CQ06413 473 aaPredicted RBP23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 THOC7Q6I9Y2 204 aaKnown RBP23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 C11orf1Q9H5F2 150 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 GAB2Q9UQC2 676 aa23.52■■□□□ 1.36
CTDNEP1-210ENST00000574322 MEX3AA1L020 520 aaKnown RBP23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 NDUFA2O43678 99 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 PITX3O75364 302 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 SPDEFO95238 335 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 S100A1P23297 94 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 ID3Q02535 119 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 CATR1Q13166 79 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 HSD17B10Q99714 261 aaKnown RBP23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 ZNF471Q9BX82 626 aaPredicted RBP23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 CYTL1Q9NRR1 136 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 SDHAF2Q9NX18 166 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 GFOD1Q9NXC2 390 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 TAS2R3Q9NYW6 316 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 SLC25A10Q9UBX3 287 aaPredicted RBP23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 PSG11Q9UQ72 335 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 LINC00312Q9Y6C7 94 aa23.51■■□□□ 1.35
CTDNEP1-210ENST00000574322 hADV38S2A0JD32 116 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 F5H0A9 414 aaPredicted RBP23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 TAAR5O14804 337 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 RPL12P30050 165 aaKnown RBP23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 NKX2-1P43699 371 aaPredicted RBP23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 RAB14P61106 215 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 DMBX1Q8NFW5 382 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 ST8SIA5O15466 376 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 P2RY1P47900 373 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 ALKAL2Q6UX46 152 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 GPR146Q96CH1 333 aa23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 RCL1Q9Y2P8 373 aaKnown RBP23.5■■□□□ 1.35
CTDNEP1-210ENST00000574322 COL12A1Q99715 3063 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms