RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ST6GALNAC5Q9BVH7 336 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 C1RLQ9NZP8 487 aa8.87□□□□□ -0.99
CHD3-216ENST00000573936 ZNF230Q9UIE0 474 aaPredicted RBP8.87□□□□□ -0.99
CHD3-216ENST00000573936 ELF5Q9UKW6 265 aaPredicted RBP8.87□□□□□ -0.99
CHD3-216ENST00000573936 IGHV1-3A0A0C4DH29 117 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 FAM90A9PA6NNJ1 464 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 FAM25AB3EWG3 89 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 FAM25CB3EWG5 89 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 FAM25GB3EWG6 89 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 RAB29O14966 203 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 BET1O15155 118 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 GSTT2P0CG29 244 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 GSTT2BP0CG30 244 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 CD1BP29016 333 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 TNFSF8P32971 234 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 TAS2R20P59543 309 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 CNIH2Q6PI25 160 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 MOB3BQ86TA1 216 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 TGIF2LXQ8IUE1 241 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 RTN4IP1Q8WWV3 396 aaPredicted RBP8.86□□□□□ -0.99
CHD3-216ENST00000573936 S1PR3Q99500 378 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 GINS4Q9BRT9 223 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 BEX1Q9HBH7 125 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 OR1A1Q9P1Q5 309 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 ADAM30Q9UKF2 790 aa8.86□□□□□ -0.99
CHD3-216ENST00000573936 TRBV6-7A0A0A0MS04 114 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 IGKV1-6A0A0C4DH72 117 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 A0A1W2PPI3 338 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 TIMM23O14925 209 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 SSX5O60225 188 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 TSPAN9O75954 239 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 TPPPO94811 219 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 S100A5P33763 92 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 PRSS3P35030 304 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 RAG2P55895 527 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 DIAPH2-AS1Q14236 149 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 PDLIM3Q53GG5 364 aaPredicted RBP8.85□□□□□ -0.99
CHD3-216ENST00000573936 IGSF11Q5DX21 431 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 HOGA1Q86XE5 327 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 DRAM1Q8N682 238 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 C15orf40Q8WUR7 153 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 MAFIPQ8WZ33 124 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 RBM14Q96PK6 669 aaKnown RBP8.85□□□□□ -0.99
CHD3-216ENST00000573936 NPFFR1Q9GZQ6 430 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 C11orf54Q9H0W9 315 aaPredicted RBP8.85□□□□□ -0.99
CHD3-216ENST00000573936 C16orf95Q9H693 158 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 RANBP3Q9H6Z4 567 aaPredicted RBP8.85□□□□□ -0.99
CHD3-216ENST00000573936 IFT46Q9NQC8 304 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 RDH8Q9NYR8 311 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 ANXA10Q9UJ72 324 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 ZNF221Q9UK13 617 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 MMP24Q9Y5R2 645 aa8.85□□□□□ -0.99
CHD3-216ENST00000573936 M0QZK8 103 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 OR2F2O95006 317 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 SNRNP70P08621 437 aaKnown RBP8.84□□□□□ -0.99
CHD3-216ENST00000573936 REG1BP48304 166 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 ARPC4P59998 168 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 DEFA6Q01524 100 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 HES1Q14469 280 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 HABP2Q14520 560 aaPredicted RBP8.84□□□□□ -0.99
CHD3-216ENST00000573936 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 AWAT1Q58HT5 328 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 PRR31Q5SQ13 230 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 SHISA2Q6UWI4 295 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 CCBE1Q6UXH8 406 aaPredicted RBP8.84□□□□□ -0.99
CHD3-216ENST00000573936 CCDC190Q86UF4 302 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 TMEM219Q86XT9 240 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 ODF3L1Q8IXM7 274 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.84□□□□□ -0.99
CHD3-216ENST00000573936 BEST4Q8NFU0 473 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 OR4C13Q8NGP0 309 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 OR2T10Q8NGZ9 312 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 OR56B4Q8NH76 319 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 CFHR4Q92496 578 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 DIRAS2Q96HU8 199 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 IFI27L2Q9H2X8 130 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 EXTL2Q9UBQ6 330 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 GAB2Q9UQC2 676 aa8.84□□□□□ -0.99
CHD3-216ENST00000573936 RBM7Q9Y580 266 aaKnown RBP8.84□□□□□ -0.99
CHD3-216ENST00000573936 SAA2-SAA4A0A096LPE2 208 aa8.83□□□□□ -1
CHD3-216ENST00000573936 CLPSL1A2RUU4 121 aa8.83□□□□□ -1
CHD3-216ENST00000573936 SULT1C2O00338 296 aa8.83□□□□□ -1
CHD3-216ENST00000573936 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CHD3-216ENST00000573936 IGKV1-33P01594 117 aa8.83□□□□□ -1
CHD3-216ENST00000573936 HLA-DQB1P01920 261 aa8.83□□□□□ -1
CHD3-216ENST00000573936 SAA2P0DJI9 122 aaPredicted RBP8.83□□□□□ -1
CHD3-216ENST00000573936 TMEM11P17152 192 aa8.83□□□□□ -1
CHD3-216ENST00000573936 CD24P25063 80 aa8.83□□□□□ -1
CHD3-216ENST00000573936 GPR12P47775 334 aa8.83□□□□□ -1
CHD3-216ENST00000573936 RELBQ01201 579 aa8.83□□□□□ -1
CHD3-216ENST00000573936 EBI3Q14213 229 aa8.83□□□□□ -1
CHD3-216ENST00000573936 C11orf88Q6PI97 169 aa8.83□□□□□ -1
CHD3-216ENST00000573936 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
CHD3-216ENST00000573936 Q6ZSV7 163 aa8.83□□□□□ -1
CHD3-216ENST00000573936 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
CHD3-216ENST00000573936 H1FOOQ8IZA3 346 aaPredicted RBP8.83□□□□□ -1
CHD3-216ENST00000573936 SOSTQ9BQB4 213 aa8.83□□□□□ -1
CHD3-216ENST00000573936 AGMATQ9BSE5 352 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms