RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SNRPGP62308 76 aaKnown RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 MFGE8Q08431 387 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR2F1Q13607 317 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF345Q14585 488 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TMEM187Q14656 261 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 P2RY14Q15391 338 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 ZNF678Q5SXM1 525 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 CARD17Q5XLA6 110 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 LPCAT3Q6P1A2 487 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 NIPAL3Q6P499 406 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 Q6ZVQ6 151 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TMUB2Q71RG4 321 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 MISPQ8IVT2 679 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 STHQ8IWL8 128 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 SLC30A8Q8IWU4 369 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TOMM5Q8N4H5 51 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 COX18Q8N8Q8 333 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 ZSCAN4Q8NAM6 433 aaPredicted RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 HSD17B11Q8NBQ5 300 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR10K1Q8NGX5 313 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 PIGXQ8TBF5 258 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 STAG3L4Q8TBR4 150 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TWIST2Q8WVJ9 160 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 UPRTQ96BW1 309 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 NEURL3Q96EH8 262 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 TIMD4Q96H15 378 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 PPP1R36Q96LQ0 422 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 AMDHD1Q96NU7 426 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 OR2A7Q96R45 310 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 BARHL1Q9BZE3 327 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 POLR2J2Q9GZM3 115 aaKnown RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 MED20Q9H944 212 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 C1orf109Q9NX04 203 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 NUDT4Q9NZJ9 180 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 VAPAQ9P0L0 249 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 FBXL3Q9UKT7 428 aa4.22□□□□□ -1.73
SF3B3-214ENST00000572365 EXOSC1Q9Y3B2 195 aaKnown RBP4.22□□□□□ -1.73
SF3B3-214ENST00000572365 IGHV3-64DA0A0J9YX35 117 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 TRDV1A0A1B0GX56 115 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 BTBD17A6NE02 478 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 A8MT66 165 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SEC14L6B5MCN3 397 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SIGLEC5O15389 551 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GSTZ1O43708 216 aaPredicted RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 NDUFS6O75380 124 aaKnown RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GATBO75879 557 aaKnown RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 IGKV3-15P01624 115 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF35P13682 527 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 NCK1P16333 377 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 HTR2CP28335 458 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GPR183P32249 361 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 BMI1P35226 326 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GLRXP35754 106 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RBM34P42696 430 aaKnown RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OMPP47874 163 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 HTR5AP47898 357 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 DAPP51397 102 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 PRKXP51817 358 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 DLX1P56177 255 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SMIM11AP58511 58 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RAP1BP61224 184 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 FGF12P61328 243 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RAP1AP62834 184 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 BDH1Q02338 343 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GPR176Q14439 515 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SLC17A1Q14916 467 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 HERPUD1Q15011 391 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 USF2Q15853 346 aaPredicted RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GSG1Q2KHT4 349 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 TMEM255AQ5JRV8 349 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 PHYHD1Q5SRE7 291 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SLC25A30Q5SVS4 291 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SPATA46Q5T0L3 261 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 BCL2L15Q5TBC7 163 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RAB12Q6IQ22 244 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 NOXRED1Q6NXP6 359 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 CNIH2Q6PI25 160 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 FRRS1Q6ZNA5 592 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 CYP4Z1Q86W10 505 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OR2L13Q8N349 312 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 COMMD1Q8N668 190 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OR9K2Q8NGE7 335 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OR4K15Q8NH41 348 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OR5W2Q8NH69 310 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 OR1S1Q8NH92 325 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF563Q8TA94 476 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 C8orf46Q8TAG6 207 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GNPDA2Q8TDQ7 276 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 HIST1H2ACQ93077 130 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 ITCHQ96J02 903 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SPXQ9BT56 116 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 ARL6Q9H0F7 186 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SYT4Q9H2B2 425 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 MIEF1Q9NQG6 463 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 TXNL4BQ9NX01 149 aaKnown RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RASL12Q9NYN1 266 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 ZNF319Q9P2F9 582 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 GHRLQ9UBU3 117 aa4.21□□□□□ -1.74
SF3B3-214ENST00000572365 RPUSD1Q9UJJ7 312 aaKnown RBP4.21□□□□□ -1.74
SF3B3-214ENST00000572365 SLC9A8Q9Y2E8 581 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms