RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PQLC2LA1A4F0 135 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 FUOMA2VDF0 154 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 A6NIN4 97 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 ANKRD65E5RJM6 399 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 TRAPPC2LH3BP13 241 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 BOLA2-SMG1P6H3BVE0 249 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 PHOX2AO14813 284 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 MYL12BO14950 172 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 SIGLEC5O15389 551 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 NOS1APO75052 506 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 WBP4O75554 376 aaKnown RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 GYPAP02724 150 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 MELTFP08582 738 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 HCKP08631 526 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 PIPP12273 146 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 RAB3AP20336 220 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CD80P33681 288 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 GABRA2P47869 451 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CAPZA1P52907 286 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CAV3P56539 151 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 TAS2R43P59537 309 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 PPP3R1P63098 170 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 ADARB1P78563 741 aaKnown RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 ST3GAL4Q11206 333 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 IL24Q13007 206 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 RIPK1Q13546 671 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 LRRC37A5PQ49AS3 106 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 SPIN3Q5JUX0 258 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 FAM201AQ5SY85 155 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 GPR157Q5UAW9 335 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 WDR25Q64LD2 544 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 NCR3LG1Q68D85 454 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 TMEM42Q69YG0 159 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 LYPD2Q6UXB3 125 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 BAIAP2L2Q6UXY1 529 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 TMEM182Q6ZP80 229 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 Q6ZSR3 168 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 TMUB2Q71RG4 321 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 UTS2BQ765I0 119 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 C11orf53Q8IXP5 236 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 RDH10Q8IZV5 341 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 ZNF561Q8N587 486 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 OR5D13Q8NGL4 314 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 OR52N1Q8NH53 320 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CNIH3Q8TBE1 160 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 SUN5Q8TC36 379 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 GPR148Q8TDV2 347 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 AQP3Q92482 292 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 FGGYQ96C11 551 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 PELI1Q96FA3 418 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CEP19Q96LK0 163 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 OPALINQ96PE5 141 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 S100A13Q99584 98 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 CCL13Q99616 98 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 MND1Q9BWT6 205 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 Q9H521 79 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 FGF20Q9NP95 211 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 GPR173Q9NS66 373 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 PAK1IP1Q9NWT1 392 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 ZNF107Q9UII5 783 aaPredicted RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 NUP50Q9UKX7 468 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 RRP15Q9Y3B9 282 aaKnown RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 TPRKBQ9Y3C4 175 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 RTTNQ86VV8 2226 aa3.03□□□□□ -1.93
NUP88-202ENST00000570937 SETD2Q9BYW2 2564 aaPredicted RBP3.03□□□□□ -1.93
NUP88-202ENST00000570937 DYSFO75923 2080 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ABCA1O95477 2261 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RFPL4AA6NLU0 287 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 OR4C45A6NMZ5 311 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RNF212BA8MTL3 300 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ZNF879B4DU55 563 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RFPL4AL1F8VTS6 287 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 H3BSH0 61 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 SH2D1BO14796 132 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 TXNL1O43396 289 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 AKR7A2O43488 359 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 SULT1B1O43704 296 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ZNF780AO75290 641 aaPredicted RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 RHBDL1O75783 438 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 CLIC3O95833 236 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 GNAO1P09471 354 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 LIMS3P0CW19 117 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 LIMS4P0CW20 117 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 PGA5P0DJD9 388 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 PSG2P11465 335 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ATF1P18846 271 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 MAPK3P27361 379 aaPredicted RBP3.02□□□□□ -1.93
NUP88-202ENST00000570937 PRDX2P32119 198 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RANBP1P43487 201 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 KIR3DL2P43630 455 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ETV1P50549 477 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 ARPC4P59998 168 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 GMFBP60983 142 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 PDZK1IP1Q13113 114 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 KISS1Q15726 138 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 UBE2V2Q15819 145 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 YIF1BQ5BJH7 314 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 RNLSQ5VYX0 342 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 STUMQ69YW2 141 aa3.02□□□□□ -1.93
NUP88-202ENST00000570937 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms