RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 LRRC42Q9Y546 428 aa4.25□□□□□ -1.73
CHD3-212ENST00000570758 IFITM5A6NNB3 132 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 NUDT19A8MXV4 375 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 TRDCB7Z8K6 153 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 H0YJW9 148 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 MFNGO00587 321 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 PDCD5O14737 125 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 RAB29O14966 203 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 DENRO43583 198 aaKnown RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 PROP1O75360 226 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 PF4P02776 101 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 RPLP1P05386 114 aaKnown RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 CD3GP09693 182 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 CT45A6P0DMU7 189 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 CT45A5P0DMU8 189 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 CT45A7P0DMV0 189 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 SLC2A2P11168 524 aaPredicted RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 GNB3P16520 340 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 RAB3BP20337 219 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 GALP22466 123 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 MYL9P24844 172 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 CEACAM6P40199 344 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 THBS3P49746 956 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 PSMD7P51665 324 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 LINC00205P59089 165 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 ACTBP60709 375 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 SLC35B1P78383 322 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 MMDQ15546 238 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 C5orf64Q2M2E5 130 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 FAM71F2Q6NXP2 309 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 ZNF773Q6PK81 442 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 GLDNQ6ZMI3 551 aaPredicted RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 MRPL41Q8IXM3 137 aaKnown RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 OR56B1Q8NGI3 324 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 MAFIPQ8WZ33 124 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 RAB3CQ96E17 227 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 DUX3Q96PT4 197 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 RIMS4Q9H426 269 aaPredicted RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 C12orf4Q9NQ89 552 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 ZFP57Q9NU63 452 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 NECAP2Q9NVZ3 263 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 ZNF107Q9UII5 783 aaPredicted RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 ELF5Q9UKW6 265 aaPredicted RBP4.24□□□□□ -1.73
CHD3-212ENST00000570758 RNF150Q9ULK6 438 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 WSB1Q9Y6I7 421 aa4.24□□□□□ -1.73
CHD3-212ENST00000570758 IGKV1D-8A0A087WSZ0 117 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 IGHV7-81A0A0B4J1V7 117 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 G3V318 75 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 RAB27BO00194 218 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 ITGB1BP1O14713 200 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 ATP6V0E1O15342 81 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NBR2O15453 112 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FABP7O15540 132 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NDUFA3O95167 84 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 IGHG4P01861 327 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 IGF1P05019 195 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FCGR3AP08637 254 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 CLEC2LP0C7M8 214 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 GSTT2P0CG29 244 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 GSTT2BP0CG30 244 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 HIST1H1DP16402 221 aaKnown RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 RAB6AP20340 208 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 VDAC1P21796 283 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 SOX6P35712 828 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 MYCNOSP40205 109 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 KRTAP10-11P60412 298 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NDPQ00604 133 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FOXE3Q13461 319 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 PNLIPRP3Q17RR3 467 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 DEFB136Q30KP8 78 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 IGSF11Q5DX21 431 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 TEX38Q6PEX7 206 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 ZNF695Q8IW36 515 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 COMMD1Q8N668 190 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 ZNF383Q8NA42 475 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 DRAXINQ8NBI3 349 aaPredicted RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 KLHL30-AS1Q8NEE0 82 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 NPBQ8NG41 125 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 OR5AN1Q8NGI8 311 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 OR10R2Q8NGX6 335 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 MRAPQ8TCY5 172 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FCGR1BQ92637 280 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 PTX4Q96A99 478 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 C5orf30Q96GV9 206 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 RCC1LQ96I51 464 aaKnown RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 RAX2Q96IS3 184 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 KCTD7Q96MP8 289 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 P2RX4Q99571 388 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 AGMATQ9BSE5 352 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 CABLES2Q9BTV7 478 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 OR51E2Q9H255 320 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 FBXL15Q9H469 300 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 Q9H521 79 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 RNF167Q9H6Y7 350 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 PARP11Q9NR21 331 aa4.23□□□□□ -1.73
CHD3-212ENST00000570758 TXNL4BQ9NX01 149 aaKnown RBP4.23□□□□□ -1.73
CHD3-212ENST00000570758 RDH8Q9NYR8 311 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms